RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 BNIPLQ7Z465 357 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PIGWQ7Z7B1 504 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 FAM228AQ86W67 206 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PALM2Q8IXS6 379 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 VPS52Q8N1B4 723 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SIX6OS1Q8N1H7 587 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 C12orf29Q8N999 325 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SLC2A14Q8TDB8 520 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 UBASH3BQ8TF42 649 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 TMEM40Q8WWA1 233 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 UTP4Q969X6 686 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 MTBPQ96DY7 904 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 KLHDC7BQ96G42 594 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 C9orf72Q96LT7 481 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 MAGEB18Q96M61 343 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PPP1R2P1Q96PQ5 205 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 QKIQ96PU8 341 aaKnown RBP eCLIP5.75□□□□□ -1.49
PCF11-205ENST00000530906 SLC2A13Q96QE2 648 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PEBP4Q96S96 227 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SMC6Q96SB8 1091 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 NPY6RQ99463 290 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 DHRS4Q9BTZ2 278 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 NRDE2Q9H7Z3 1164 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 VPS37BQ9H9H4 285 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 USP29Q9HBJ7 922 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 POPDC2Q9HBU9 364 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 LRRC4Q9HBW1 653 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 LRRC4CQ9HCJ2 640 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 FAM49BQ9NUQ9 324 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 FAM105AQ9NUU6 356 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 MKS1Q9NXB0 559 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 DDX20Q9UHI6 824 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 XPO7Q9UIA9 1087 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 AP4E1Q9UPM8 1137 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 CDY2AQ9Y6F7 541 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 IKBKGQ9Y6K9 419 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 DOCK3Q8IZD9 2030 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 COL4A4P53420 1690 aaPredicted RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 KRT37O76014 449 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 CYP11A1P05108 521 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 VIMP08670 466 aaKnown RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 CD48P09326 243 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ODC1P11926 461 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 COL6A1P12109 1028 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 KRT15P19012 456 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 TYMPP19971 482 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 IL4RP24394 825 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 AKAP5P24588 427 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 CYP2F1P24903 491 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ADORA2BP29275 332 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 MSH2P43246 934 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 MAGEA3P43357 314 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 GLUD2P49448 558 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 RGS7P49802 495 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 SERPINB9P50453 376 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 BASP1P80723 227 aaKnown RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 MGAT3Q09327 533 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 CCDC15Q0P6D6 951 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 TMEM62Q0P6H9 643 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 GRIK3Q13003 919 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 CRHR2Q13324 411 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 SEMA5AQ13591 1074 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 FRG1Q14331 258 aaKnown RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 PDK1Q15118 436 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 TMED2Q15363 201 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 CCL14Q16627 93 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 C15orf59Q2T9L4 293 aaPredicted RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 ARL13BQ3SXY8 428 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 RAB41Q5JT25 222 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 GLRA4Q5JXX5 417 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 SPDYAQ5MJ70 313 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 PRAMEF19Q5SWL8 479 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ACBD5Q5T8D3 534 aaPredicted RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 TMEM164Q5U3C3 297 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 HEATR6Q6AI08 1181 aaKnown RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 TTC19Q6DKK2 380 aaPredicted RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 PDE12Q6L8Q7 609 aaKnown RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 SCYL2Q6P3W7 929 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 C3orf62Q6ZUJ4 267 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 PIGZQ86VD9 579 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 METTL23Q86XA0 190 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 UNC45BQ8IWX7 931 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 FAM20CQ8IXL6 584 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 SRRM1Q8IYB3 904 aaKnown RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 FUKQ8N0W3 1084 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 PQLC3Q8N755 202 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 FAM71DQ8N9W8 422 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 GLIS1Q8NBF1 620 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 PCDH19Q8TAB3 1148 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ZNF398Q8TD17 642 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 WNT8BQ93098 351 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ACSF2Q96CM8 615 aaPredicted RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 SMARCD1Q96GM5 515 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 SENP8Q96LD8 212 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 OLFM3Q96PB7 478 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 CSPG4P5Q96PW8 444 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 VAT1Q99536 393 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 FAM118BQ9BPY3 351 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 SYT15Q9BQS2 421 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ACBD6Q9BR61 282 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms