RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 C17orf80Q9BSJ5 609 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 RNPEPQ9H4A4 650 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 AVENQ9NQS1 362 aaPredicted RBP14.46□□□□□ -0.09
PCF11-204ENST00000530660 MEIS2O14770 477 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 AURKAO14965 403 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 MSH4O15457 936 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 NOL3O60936 208 aaKnown RBP14.46□□□□□ -0.09
PCF11-204ENST00000530660 FYNP06241 537 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 CSH1P0DML2 217 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 CSH2P0DML3 217 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 RAD23AP54725 363 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 MAMLD1Q13495 774 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 DPYSQ14117 519 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 RALGPS2Q86X27 583 aaPredicted RBP14.46□□□□□ -0.09
PCF11-204ENST00000530660 GRAMD2AQ8IUY3 354 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 FAM71DQ8N9W8 422 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 ABHD11Q8NFV4 315 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 FAM110BQ8TC76 370 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 TMA16Q96EY4 203 aaKnown RBP14.46□□□□□ -0.09
PCF11-204ENST00000530660 PI4K2AQ9BTU6 479 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 COG4Q9H9E3 785 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 SFMBT1Q9UHJ3 866 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 TEX264Q9Y6I9 313 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 NHSQ6T4R5 1651 aa14.46□□□□□ -0.09
PCF11-204ENST00000530660 TOR1BO14657 336 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 CRYZL1O95825 349 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 TGM1P22735 817 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 CCSAPQ6IQ19 270 aaPredicted RBP14.46□□□□□ -0.1
PCF11-204ENST00000530660 C16orf89Q6UX73 402 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 C1orf186Q6ZWK4 172 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 OFCC1Q8IZS5 231 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 RSAD2Q8WXG1 361 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 DLG3Q92796 817 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 VTI1AQ96AJ9 217 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 PPWD1Q96BP3 646 aaKnown RBP14.46□□□□□ -0.1
PCF11-204ENST00000530660 SH3YL1Q96HL8 342 aaPredicted RBP14.46□□□□□ -0.1
PCF11-204ENST00000530660 VCPIP1Q96JH7 1222 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 IL12RB2Q99665 862 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 AASDHPPTQ9NRN7 309 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 DNAJC28Q9NX36 388 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 GDAP2Q9NXN4 497 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 VAV3Q9UKW4 847 aa14.46□□□□□ -0.1
PCF11-204ENST00000530660 ILVBLA1L0T0 632 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 TRIM64BA6NI03 449 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 PIK3R1P27986 724 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 CRHR1P34998 444 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 IST1P53990 364 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 RHBDL3P58872 404 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 BFSP2Q13515 415 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 DGKDQ16760 1214 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 HEATR4Q86WZ0 1026 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 C10orf107Q8IVU9 208 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 SLC35B2Q8TB61 432 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 HCAR2Q8TDS4 363 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 NT5C1BQ96P26 610 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 ZNF347Q96SE7 839 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 MUC3BQ9H195 1237 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 WDR41Q9HAD4 459 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 PARVAQ9NVD7 372 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 ROBO1Q9Y6N7 1651 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 hCG_1818297A0A087WSY0 165 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 CLDN25C9JDP6 229 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 F8VP50 259 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 NEMP1O14524 444 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 DDHD2O94830 711 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 PTPN9P43378 593 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 RPS6P62753 249 aaKnown RBP14.45□□□□□ -0.1
PCF11-204ENST00000530660 HMBOX1Q6NT76 420 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 ANKRD13BQ86YJ7 626 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 DEPDC4Q8N2C3 294 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 NATD1Q8N6N6 113 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 ZC3H15Q8WU90 426 aaKnown RBP14.45□□□□□ -0.1
PCF11-204ENST00000530660 CSF3RQ99062 836 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 ACO2Q99798 780 aaKnown RBP14.45□□□□□ -0.1
PCF11-204ENST00000530660 TOPORSQ9NS56 1045 aaPredicted RBP14.45□□□□□ -0.1
PCF11-204ENST00000530660 C20orf96Q9NUD7 363 aaPredicted RBP14.45□□□□□ -0.1
PCF11-204ENST00000530660 SEPT3Q9UH03 358 aa14.45□□□□□ -0.1
PCF11-204ENST00000530660 E2F8A0AVK6 867 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 SAC3D1A6NKF1 404 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 PRKCAP17252 672 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 POLR2IP36954 125 aaKnown RBP14.44□□□□□ -0.1
PCF11-204ENST00000530660 CEP78Q5JTW2 689 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 N4BP2L1Q5TBK1 243 aaPredicted RBP14.44□□□□□ -0.1
PCF11-204ENST00000530660 CYP2R1Q6VVX0 501 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 CHSY3Q70JA7 882 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 WDR55Q9H6Y2 383 aaPredicted RBP14.44□□□□□ -0.1
PCF11-204ENST00000530660 CD209Q9NNX6 404 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 EMCNQ9ULC0 261 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 NRP1O14786 923 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 TPPPO94811 219 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 SERPINB2P05120 415 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 EEF1DP29692 281 aaKnown RBP14.44□□□□□ -0.1
PCF11-204ENST00000530660 PHC1P78364 1004 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 STILQ15468 1287 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 SLC10A5Q5PT55 438 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 HERC6Q8IVU3 1022 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 CRYGNQ8WXF5 182 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 ACSS2Q9NR19 701 aa14.44□□□□□ -0.1
PCF11-204ENST00000530660 ZNF839A8K0R7 811 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms