RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 PTPN20Q4JDL3 420 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 INO80DQ53TQ3 878 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 EFHC1Q5JVL4 640 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 C10orf120Q5SQS8 335 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 FBXL19Q6PCT2 694 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 SARM1Q6SZW1 724 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 HTR3DQ70Z44 454 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 ERICH1Q86X53 443 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 ZDHHC17Q8IUH5 632 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 ZNF397Q8NF99 534 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 RNF139Q8WU17 664 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 OSCP1Q8WVF1 389 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 CPA5Q8WXQ8 436 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 SYN2Q92777 582 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 N4BP2L2Q92802 583 aaPredicted RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 DNASE1L2Q92874 299 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 NINJ1Q92982 152 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 WBP2Q969T9 261 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 C18orf8Q96DM3 657 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 THOC1Q96FV9 657 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 ZFYVE19Q96K21 471 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 PCDHB18PQ96TA0 734 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 AGPAT1Q99943 283 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 SYT11Q9BT88 431 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 C1QTNF1Q9BXJ1 281 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 SLC7A5P2Q9GIP4 190 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 NPHS2Q9NP85 383 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 C11orf16Q9NQ32 467 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 OLA1Q9NTK5 396 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 DUS2Q9NX74 493 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 SMPD4Q9NXE4 827 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 SPATA7Q9P0W8 599 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 CFAP97Q9P2B7 532 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 TBC1D14Q9P2M4 693 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 TJP2Q9UDY2 1190 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 LUC7L2Q9Y383 392 aaKnown RBP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 DENND4CQ5VZ89 1909 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 ANAPC1Q9H1A4 1944 aa6.52□□□□□ -1.37
ATPAF1-209ENST00000529214 MYH10P35580 1976 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 A0A1W2PRQ8 180 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 OTOL1A6NHN0 477 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 A6NJY4 79 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SHISA7A6NL88 538 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SLC9A3R1O14745 358 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 MDM4O15151 490 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 AKAP10O43572 662 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 ERBB2P04626 1255 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 GYPCP04921 128 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 NCAM1P13591 858 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 TNFAIP3P21580 790 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 MMP8P22894 467 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 RDXP35241 583 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SLC6A3Q01959 620 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 TNK2Q07912 1038 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 EFEMP1Q12805 493 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 COX10Q12887 443 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SEPT6Q14141 434 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 PDGFRLQ15198 375 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 TAF5Q15542 800 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 MLF2Q15773 248 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SFMBT2Q5VUG0 894 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SYPL2Q5VXT5 272 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 NAA35Q5VZE5 725 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 E4F1Q66K89 784 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SPECC1LQ69YQ0 1117 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 TRIM68Q6AZZ1 485 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 OR6B2Q6IFH4 312 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 MSANTD2Q6P1R3 559 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 TRIM72Q6ZMU5 477 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 CCDC80Q76M96 950 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 RSRC2Q7L4I2 434 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 MIB1Q86YT6 1006 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 SLC30A5Q8TAD4 765 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 CSGALNACT1Q8TDX6 532 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 TBC1D20Q96BZ9 403 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 OTUB2Q96DC9 234 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 TRIM56Q9BRZ2 755 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 DDX23Q9BUQ8 820 aaKnown RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 ASPSCR1Q9BZE9 553 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 EBF3Q9H4W6 596 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 HAUS4Q9H6D7 363 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 ECT2Q9H8V3 914 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 PPCSQ9HAB8 311 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 POPDC2Q9HBU9 364 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 HPS4Q9NQG7 708 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 ARHGEF3Q9NR81 526 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 HEBP1Q9NRV9 189 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 ASNSD1Q9NWL6 643 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 QPCTLQ9NXS2 382 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 GTSE1Q9NYZ3 720 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 MARCH2Q9P0N8 246 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 EVLQ9UI08 416 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 FOXD3Q9UJU5 478 aaPredicted RBP6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 FBXL21Q9UKT6 434 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 CA14Q9ULX7 337 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 PPT2Q9UMR5 302 aa6.51□□□□□ -1.37
ATPAF1-209ENST00000529214 NAALADL1Q9UQQ1 740 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms