RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CTGFP29279 349 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 GMPSP49915 693 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 ITGA8P53708 1063 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 RPS8P62241 208 aaKnown RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 NSUN2Q08J23 767 aaKnown RBP eCLIP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 AIMP1Q12904 312 aaKnown RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 MTAPQ13126 283 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 DDX10Q13206 875 aaKnown RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 TRIM71Q2Q1W2 868 aaKnown RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 FAM153CQ494X1 144 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 TMTC4Q5T4D3 741 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 METTL25Q8N6Q8 603 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 ENAHQ8N8S7 591 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 CAPNS2Q96L46 248 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 HAPLN3Q96S86 360 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 NUDT22Q9BRQ3 303 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 WDR26Q9H7D7 661 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 IGSF9Q9P2J2 1179 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 CNOT7Q9UIV1 285 aaKnown RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 SLC39A10Q9ULF5 831 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 ST3GAL5Q9UNP4 418 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 USP22Q9UPT9 525 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 LRCH1Q9Y2L9 728 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 LTBP1Q14766 1721 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 THSD7BQ9C0I4 1608 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 LRRC37AA6NMS7 1700 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 ZNF213O14771 459 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 NPC1O15118 1278 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 SPRY2O43597 315 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 COQ9O75208 318 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 PMPCBO75439 489 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 DDX58O95786 925 aaKnown RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 GLP2RO95838 553 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 ITGA5P08648 1049 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 HSPA8P11142 646 aaKnown RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 PECAM1P16284 738 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 DRD4P21917 467 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 PDIA3P30101 505 aaKnown RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 RGS19P49795 217 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 LBX1P52954 281 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 GALNT1Q10472 559 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 STK3Q13188 491 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 OS9Q13438 667 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 PTK2BQ14289 1009 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 KRT24Q2M2I5 525 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 AARS2Q5JTZ9 985 aaKnown RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 C10orf62Q5T681 223 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 CCDC30Q5VVM6 783 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 ZNF788Q6ZQV5 615 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 AMIGO2Q86SJ2 522 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 SKAP1Q86WV1 359 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 CCDC150Q8NCX0 1101 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 AGBL3Q8NEM8 1001 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 TBC1D5Q92609 795 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 EID2BQ96D98 161 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 HIST1H2AAQ96QV6 131 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 PRR25Q96S07 402 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 GAR1Q9NY12 217 aaKnown RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 TMOD4Q9NZQ9 345 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 POLLQ9UGP5 575 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 ABT1Q9ULW3 272 aaKnown RBP5.46□□□□□ -1.54
CSDE1-212ENST00000529046 SLC27A6Q9Y2P4 619 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 WNT6Q9Y6F9 365 aa5.46□□□□□ -1.54
CSDE1-212ENST00000529046 IFRD1O00458 451 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-212ENST00000529046 PSMD14O00487 310 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 TCERG1O14776 1098 aaKnown RBP5.45□□□□□ -1.54
CSDE1-212ENST00000529046 PCDH17O14917 1159 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 DLDP09622 509 aaKnown RBP5.45□□□□□ -1.54
CSDE1-212ENST00000529046 CDK4P11802 303 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 CD19P15391 556 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 LMO1P25800 156 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 NTSR1P30989 418 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 PROK1P58294 105 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 FKBP1BP68106 108 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 FOXO1Q12778 655 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 TUBB8Q3ZCM7 444 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 CCDC152Q4G0S7 254 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 ERAP2Q6P179 960 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 C1orf228Q6PIY5 440 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 RASAL3Q86YV0 1011 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 LINC01465Q8N7H1 131 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.45□□□□□ -1.543e-12■□□□□ 9.4
CSDE1-212ENST00000529046 TBC1D16Q8TBP0 767 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 FAM71BQ8TC56 605 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 POF1BQ8WVV4 589 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 CELF1Q92879 486 aaKnown RBP5.45□□□□□ -1.54
CSDE1-212ENST00000529046 LENG8Q96PV6 779 aaPredicted RBP5.45□□□□□ -1.54
CSDE1-212ENST00000529046 ARPC5LQ9BPX5 153 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.45□□□□□ -1.54
CSDE1-212ENST00000529046 SAGE1Q9NXZ1 904 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 STEAP1Q9UHE8 339 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 DUOX1Q9NRD9 1551 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 IL16Q14005 1332 aa5.45□□□□□ -1.54
CSDE1-212ENST00000529046 RTL9Q8NET4 1388 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 GXYLT2A0PJZ3 443 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 SYT5O00445 386 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 SNX2O60749 519 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 CELF2O95319 508 aaKnown RBP5.44□□□□□ -1.54
CSDE1-212ENST00000529046 EBLN1P0CF75 366 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 MCM5P33992 734 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms