RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PTPRAP18433 802 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PACS1Q6VY07 963 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 SEMA6AQ9H2E6 1030 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 ARMC7Q9H6L4 198 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PSMD13Q9UNM6 376 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 TGM2P21980 687 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PTGER2P43116 358 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 CD97P48960 835 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 NUP107P57740 925 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 BOLA3Q53S33 107 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 TMEM53Q6P2H8 277 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 RNF111Q6ZNA4 994 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 EPB41L1Q9H4G0 881 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 AP4E1Q9UPM8 1137 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 PLLPQ9Y342 182 aa18.29■□□□□ 0.52
LTBP3-210ENST00000528516 IGKV6D-41A0A0C4DH26 115 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 B3GAT3O94766 335 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 CCDC130P13994 396 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 FGFR3P22607 806 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 SLC5A3P53794 718 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 FSTL1Q12841 308 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 KCNT2Q6UVM3 1135 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 FBXW8Q8N3Y1 598 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 CNPY3Q9BT09 278 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 FAIMQ9NVQ4 179 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 THAP1Q9NVV9 213 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 TRNAU1APQ9NX07 287 aaKnown RBP18.28■□□□□ 0.52
LTBP3-210ENST00000528516 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 SIN3BO75182 1162 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 TMEM63AO94886 807 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 VARSP26640 1264 aaKnown RBP18.28■□□□□ 0.52
LTBP3-210ENST00000528516 MAP3K7CLP57077 242 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 LRRC8EQ6NSJ5 796 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 FASTKD5Q7L8L6 764 aaKnown RBP18.28■□□□□ 0.52
LTBP3-210ENST00000528516 ZNF410Q86VK4 478 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 ZNF276Q8N554 614 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 PIWIL2Q8TC59 973 aaKnown RBP18.28■□□□□ 0.52
LTBP3-210ENST00000528516 TMIGD2Q96BF3 282 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 PDGFCQ9NRA1 345 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 SPATA7Q9P0W8 599 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 RBMX2Q9Y388 322 aaKnown RBP18.28■□□□□ 0.52
LTBP3-210ENST00000528516 KPNA7A9QM74 516 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 H3BRB1 525 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 TOP3BO95985 862 aaKnown RBP18.28■□□□□ 0.52
LTBP3-210ENST00000528516 OXCT1P55809 520 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 MYBPC2Q14324 1141 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 KIAA1841Q6NSI8 718 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 MIB1Q86YT6 1006 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 SLC9A9Q8IVB4 645 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 SLC44A1Q8WWI5 657 aa18.28■□□□□ 0.52
LTBP3-210ENST00000528516 TUT1Q9H6E5 874 aaKnown RBP18.28■□□□□ 0.52
LTBP3-210ENST00000528516 C10orf71Q711Q0 1435 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 CYP2F1P24903 491 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 ETV4P43268 484 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 FSCBQ5H9T9 825 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 POTEHQ6S545 545 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 PTAR1Q7Z6K3 402 aaPredicted RBP18.27■□□□□ 0.52
LTBP3-210ENST00000528516 ZSCAN18Q8TBC5 510 aaPredicted RBP18.27■□□□□ 0.52
LTBP3-210ENST00000528516 NRDE2Q9H7Z3 1164 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 ANGPTL3Q9Y5C1 460 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 GNGT2O14610 69 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 SCAMP3O14828 347 aaKnown RBP18.27■□□□□ 0.52
LTBP3-210ENST00000528516 PORP16435 677 aaPredicted RBP18.27■□□□□ 0.52
LTBP3-210ENST00000528516 HALP42357 657 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 ADRM1Q16186 407 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 GPR141Q7Z602 305 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 FAM83AQ86UY5 434 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 DQX1Q8TE96 717 aaKnown RBP18.27■□□□□ 0.52
LTBP3-210ENST00000528516 TNIP3Q96KP6 325 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 CDRT15Q96T59 188 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 TRIM17Q9Y577 477 aa18.27■□□□□ 0.52
LTBP3-210ENST00000528516 TMEM221A6NGB7 291 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 ERVK-10P10266 1014 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 MCF2P10911 925 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 CDH2P19022 906 aaPredicted RBP18.27■□□□□ 0.51
LTBP3-210ENST00000528516 KDELR1P24390 212 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 MGAT1P26572 445 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 HOXD12P35452 270 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 POU6F1Q14863 301 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 MARVELD2Q8N4S9 558 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 TMEM79Q9BSE2 394 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 PIF1Q9H611 641 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 COQ6Q9Y2Z9 468 aa18.27■□□□□ 0.51
LTBP3-210ENST00000528516 MYH11P35749 1972 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 ZNF24P17028 368 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 GRIK1P39086 918 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 SLC1A6P48664 564 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 RABGGTBP53611 331 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 MAPK10P53779 464 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 C21orf59P57076 290 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 DPYSL3Q14195 570 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 BTBD8Q5XKL5 378 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 AHI1Q8N157 1196 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 RMDN1Q96DB5 314 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 CORO1BQ9BR76 489 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 PNPOQ9NVS9 261 aa18.26■□□□□ 0.51
LTBP3-210ENST00000528516 C6orf203Q9P0P8 240 aaPredicted RBP18.26■□□□□ 0.51
LTBP3-210ENST00000528516 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms