RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RETREG1Q9H6L5 497 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 TLR8Q9NR97 1041 aaKnown RBP15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 MKS1Q9NXB0 559 aa15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 AAR2Q9Y312 384 aaKnown RBP15.15■□□□□ 0.02
ECHDC1-220ENST00000528402 A0A1W2PQH9 124 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 F8W810 466 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 TBC1D4O60343 1298 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 CACNG3O60359 315 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 POLBP06746 335 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 OR4Q2P0C623 313 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 TAC1P20366 129 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 RPA3P35244 121 aaPredicted RBP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 MAGEA9P43362 315 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 FAAP100Q0VG06 881 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 EFTUD2Q15029 972 aaKnown RBP eCLIP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 MTFR1Q15390 333 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 LACTB2Q53H82 288 aaPredicted RBP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 NAPEPLDQ6IQ20 393 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 RWDD4Q6NW29 188 aaKnown RBP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 CEP57Q86XR8 500 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 TRIM42Q8IWZ5 723 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 KLHDC8BQ8IXV7 354 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 GBP7Q8N8V2 638 aaPredicted RBP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 ATP6V0D2Q8N8Y2 350 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 GDAP1Q8TB36 358 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 LRRC8CQ8TDW0 803 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 CASP10Q92851 521 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 MRRFQ96E11 262 aaKnown RBP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 SLC39A13Q96H72 371 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 APOPT1Q96IL0 206 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 FCRL2Q96LA5 508 aaPredicted RBP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 PITPNM3Q9BZ71 974 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 UNC93B1Q9H1C4 597 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 LRRC40Q9H9A6 602 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 PPARGC1AQ9UBK2 798 aaKnown RBP15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 ARL2BPQ9Y2Y0 163 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 STARD13Q9Y3M8 1113 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 MYO16Q9Y6X6 1858 aa15.14■□□□□ 0.01
ECHDC1-220ENST00000528402 SRCAPQ6ZRS2 3230 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 FOXO6A8MYZ6 492 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 LPXNO60711 386 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 ANXA9O76027 345 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 GALTP07902 379 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 SLC11A1P49279 550 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 TBX4P57082 545 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 PPARDQ03181 441 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 ANO4Q32M45 955 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 SYCP2LQ5T4T6 812 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 RNF187Q5TA31 235 aaPredicted RBP15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 KCTD11Q693B1 232 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 MARK2Q7KZI7 788 aaKnown RBP15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 CTU1Q7Z7A3 348 aaKnown RBP15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 LRRC43Q8N309 656 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 NPWQ8N729 165 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 ACMSDQ8TDX5 336 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 LRRN4Q8WUT4 740 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 PAIP2Q9BPZ3 127 aaKnown RBP15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 TTPALQ9BTX7 342 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 GPR62Q9BZJ7 368 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 SIK2Q9H0K1 926 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 NMUR1Q9HB89 426 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 CASS4Q9NQ75 786 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 SFMBT1Q9UHJ3 866 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 VWA8A3KMH1 1905 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 NUP205Q92621 2012 aa15.13■□□□□ 0.01
ECHDC1-220ENST00000528402 ARHGAP42A6NI28 874 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 KCNK1O00180 336 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 MATN3O15232 486 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 ZBTB24O43167 697 aaPredicted RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 OAS1P00973 400 aaKnown RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 HAPLN1P10915 354 aaPredicted RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 NDST2P52849 883 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 MGAT5Q09328 741 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 TRIP4Q15650 581 aaPredicted RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 DDR2Q16832 855 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 STXBP5Q5T5C0 1151 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 C1orf53Q5VUE5 145 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 AFMIDQ63HM1 303 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 CASC4Q6P4E1 433 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 LVRNQ6Q4G3 990 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 SH2D5Q6ZV89 423 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 SPATA21Q7Z572 469 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 PRPF39Q86UA1 669 aaKnown RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 CHSY1Q86X52 802 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 CCDC117Q8IWD4 279 aaPredicted RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 ATPAF2Q8N5M1 289 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 CCDC33Q8N5R6 958 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 RTL3Q8N8U3 475 aaKnown RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 TCP10LQ8TDR4 215 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 DEPDC1BQ8WUY9 529 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 PPM1EQ8WY54 764 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 ARNTL2Q8WYA1 636 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 DPF3Q92784 378 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 FBXO32Q969P5 355 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 FCRL5Q96RD9 977 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 IQCGQ9H095 443 aaKnown RBP15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 FGFR1OP2Q9NVK5 253 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 MARCH5Q9NX47 278 aa15.12■□□□□ 0.01
ECHDC1-220ENST00000528402 KLHL14Q9P2G3 628 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms