RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NETO2Q8NC67 525 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 PPP1R36Q96LQ0 422 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 SEPT10Q9P0V9 454 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 PSAT1Q9Y617 370 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 CEP290O15078 2479 aa12.82□□□□□ -0.36
CAPN1-208ENST00000527323 IGKV6D-21A0A0A0MT36 114 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 ITGA2BP08514 1039 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 STAG3L1P0CL83 205 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 MX2P20592 715 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 ALDH1A3P47895 512 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 XIAPP98170 497 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 DEFB115Q30KQ5 88 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 MPP4Q96JB8 637 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 CEP41Q9BYV8 373 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 FAM117AQ9C073 453 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 MINDY3Q9H8M7 445 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 COPG2Q9UBF2 871 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 TRIP12Q14669 1992 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-208ENST00000527323 GPR25O00155 361 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 CFLARO15519 480 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 LGALS2P05162 132 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 ERVK-10P10266 1014 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 MYL4P12829 197 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 CYP3A5P20815 502 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 L1CAMP32004 1257 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 SERPINB5P36952 375 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 MAGEA3P43357 314 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
CAPN1-208ENST00000527323 TNFAIP2Q03169 654 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 STILQ15468 1287 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 EFCAB12Q6NXP0 572 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 PMF1Q6P1K2 205 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 NCSTNQ92542 709 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 PGBD4Q96DM1 585 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 SORT1Q99523 831 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 ZNF670Q9BS34 389 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 COG4Q9H9E3 785 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 CYP3A43Q9HB55 503 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 FAM49BQ9NUQ9 324 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 BARX2Q9UMQ3 279 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-208ENST00000527323 AKT3Q9Y243 479 aa12.81□□□□□ -0.36
CAPN1-208ENST00000527323 C15orf38-AP3S2A0A0A6YYH1 394 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 GOLGA8QA0A0J9YX86 632 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 GOLGA8OA6NCC3 632 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 GOLGA8NF8WBI6 632 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 MYL3P08590 195 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 MLH1P40692 756 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 DEUP1Q05D60 604 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 GRB14Q14449 540 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 CNGA3Q16281 694 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 DBN1Q16643 649 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 STXBP5Q5T5C0 1151 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 C17orf99Q6UX52 265 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ATG14Q6ZNE5 492 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ARPINQ7Z6K5 226 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 FAM167AQ96KS9 214 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 LRGUKQ96M69 825 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 TBCBQ99426 244 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 NT5C1AQ9BXI3 368 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 B3GNT5Q9BYG0 378 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 OCEL1Q9H607 264 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ZFYVE28Q9HCC9 887 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 RNF186Q9NXI6 227 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 WDR81Q562E7 1941 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ATP6V1B1P15313 513 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 TFE3P19532 575 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 PMLP29590 882 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 MSX2P35548 267 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 GARSP41250 739 aaKnown RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 NUDT2P50583 147 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ATXN3P54252 364 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 KLF10Q13118 480 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 KIZQ2M2Z5 673 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 CMC1Q7Z7K0 106 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 DRAXINQ8NBI3 349 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 FAM81AQ8TBF8 368 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 CPB2Q96IY4 423 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 HAPLN3Q96S86 360 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 Q9H521 79 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 SMIM31A0A1B0GVY4 71 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ASB14A6NK59 587 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ZBTB42B2RXF5 422 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 NEMP1O14524 444 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 CLPTM1O96005 669 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ZFXP17010 805 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 ARRB2P32121 409 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 FDFT1P37268 417 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 SH3BGRP55822 239 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 SLC6A3Q01959 620 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 FBXL19Q6PCT2 694 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 LCLAT1Q6UWP7 414 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 C7orf31Q8N865 590 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms