RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 FAM72DQ6L9T8 149 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 ANKRD54Q6NXT1 300 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 TRMT10CQ7L0Y3 403 aaKnown RBP19.35■□□□□ 0.69
SMPD1-203ENST00000527275 FAM72BQ86X60 149 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 VSIG1Q86XK7 387 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 SH2D3CQ8N5H7 860 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 ZFRQ96KR1 1074 aaKnown RBP19.35■□□□□ 0.69
SMPD1-203ENST00000527275 KCTD15Q96SI1 283 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-203ENST00000527275 SIK2Q9H0K1 926 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 ADAM7Q9H2U9 754 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 C10orf88Q9H8K7 445 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 PCDH9Q9HC56 1237 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 TMEM51Q9NW97 253 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 OR12D3Q9UGF7 316 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 SNX10Q9Y5X0 201 aa19.35■□□□□ 0.69
SMPD1-203ENST00000527275 HMGB1P1B2RPK0 211 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-203ENST00000527275 MCF2LO15068 1137 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 APOEP02649 317 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 SRGAP2BP0DMP2 458 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 NPNTQ6UXI9 565 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 EP400NLQ6ZTU2 488 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 RSAD2Q8WXG1 361 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 P3H4Q92791 437 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 KLF16Q9BXK1 252 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-203ENST00000527275 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-203ENST00000527275 CLEC1BQ9P126 229 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 MRPS23Q9Y3D9 190 aaKnown RBP19.34■□□□□ 0.69
SMPD1-203ENST00000527275 RIPK2O43353 540 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 CREB3O43889 395 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 STC2O76061 302 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 SHBGP04278 402 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 CBX2Q14781 532 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-203ENST00000527275 CTC1Q2NKJ3 1217 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 NUGGCQ68CJ6 796 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 GPR149Q86SP6 731 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 ITFG1Q8TB96 612 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 ING5Q8WYH8 240 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 HAPLN3Q96S86 360 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 CWC15Q9P013 229 aaKnown RBP19.34■□□□□ 0.69
SMPD1-203ENST00000527275 TPX2Q9ULW0 747 aaKnown RBP19.34■□□□□ 0.69
SMPD1-203ENST00000527275 CPQQ9Y646 472 aa19.34■□□□□ 0.69
SMPD1-203ENST00000527275 TRAV19A0A0A6YYK7 116 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 ZNF197O14709 1029 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 TBX10O75333 385 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 RBP3P10745 1247 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 GOT1P17174 413 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 LMAN1P49257 510 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 KRT71Q3SY84 523 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 MICALL1Q8N3F8 863 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 PQLC3Q8N755 202 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 PLD5Q8N7P1 536 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 PCDH19Q8TAB3 1148 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 BTN2A3PQ96KV6 586 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 PWWP2AQ96N64 755 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 ZNF670Q9BS34 389 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 SMG9Q9H0W8 520 aaKnown RBP19.33■□□□□ 0.69
SMPD1-203ENST00000527275 CDC42EP4Q9H3Q1 356 aaKnown RBP19.33■□□□□ 0.69
SMPD1-203ENST00000527275 TASP1Q9H6P5 420 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 CLDND1Q9NY35 253 aa19.33■□□□□ 0.69
SMPD1-203ENST00000527275 APOL1O14791 398 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 KLKB1P03952 638 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 IRF1P10914 325 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 HARS2P49590 506 aaKnown RBP19.33■□□□□ 0.68
SMPD1-203ENST00000527275 GDF10P55107 478 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 SEMA3BQ13214 749 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 NOMO1Q15155 1222 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 ARHGAP15Q53QZ3 475 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 UBAP2Q5T6F2 1119 aaKnown RBP19.33■□□□□ 0.68
SMPD1-203ENST00000527275 C1orf228Q6PIY5 440 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 POTEHQ6S545 545 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 UNC45BQ8IWX7 931 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 CMTM8Q8IZV2 173 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 TTC16Q8NEE8 873 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 WBP2Q969T9 261 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 FAF2Q96CS3 445 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 PKNOX2Q96KN3 472 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 ZSWIM3Q96MP5 696 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 FOXP3Q9BZS1 431 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 OSBPL2Q9H1P3 480 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 DNAJC17Q9NVM6 304 aaKnown RBP19.33■□□□□ 0.68
SMPD1-203ENST00000527275 HS3ST4Q9Y661 456 aa19.33■□□□□ 0.68
SMPD1-203ENST00000527275 ZNF487B1APH4 448 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 HOXB8P17481 243 aaPredicted RBP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 CEBPBP17676 345 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 AVPR1AP37288 418 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 SLC7A9P82251 487 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 PIK3R6Q5UE93 754 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 SLC9A4Q6AI14 798 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 ADAMTS19Q8TE59 1207 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 PLD4Q96BZ4 506 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 CSPG4P5Q96PW8 444 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 BCCIPQ9P287 314 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 SLC12A6Q9UHW9 1150 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 LRIG2O94898 1065 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 PFKLP17858 780 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 TGM2P21980 687 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 DDX6P26196 483 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMPD1-203ENST00000527275 LTBRP36941 435 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 ARL4AP40617 200 aa19.32■□□□□ 0.68
SMPD1-203ENST00000527275 MLLT6P55198 1093 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms