RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 GMPRP36959 345 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 AQP5P55064 265 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 RPL10AP62906 217 aaKnown RBP18.01■□□□□ 0.47
USH1C-205ENST00000527020 DBN1Q16643 649 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 SPANXN3Q5MJ09 141 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 DSTYKQ6XUX3 929 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 AGMOQ6ZNB7 445 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 ATG14Q6ZNE5 492 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 TRPV1Q8NER1 839 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 EDEM1Q92611 657 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 CERS2Q96G23 380 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 NUDCD1Q96RS6 583 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 MLPHQ9BV36 600 aaPredicted RBP18.01■□□□□ 0.47
USH1C-205ENST00000527020 CDH9Q9ULB4 789 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 PTCH2Q9Y6C5 1203 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 TDRD15B5MCY1 1934 aaKnown RBP18.01■□□□□ 0.47
USH1C-205ENST00000527020 CASTOR2A6NHX0 329 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 ELF1P32519 619 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 SCNN1GP51170 649 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 ZBTB17Q13105 803 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 PCLAFQ15004 111 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 TIGD5Q53EQ6 642 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 PPM1JQ5JR12 505 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 TEDDM1Q5T9Z0 273 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 CST9Q5W186 159 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 GIMAP7Q8NHV1 300 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 KCNV2Q8TDN2 545 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 SH3TC2Q8TF17 1288 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 CASS4Q9NQ75 786 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 THAP1Q9NVV9 213 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 NLRC5Q86WI3 1866 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 PATJQ8NI35 1801 aa18■□□□□ 0.47
USH1C-205ENST00000527020 CEP350Q5VT06 3117 aa18■□□□□ 0.47
USH1C-205ENST00000527020 GYG2O15488 501 aa18■□□□□ 0.47
USH1C-205ENST00000527020 CTSHP09668 335 aa18■□□□□ 0.47
USH1C-205ENST00000527020 ESRRAP11474 423 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 RGS2P41220 211 aa18■□□□□ 0.47
USH1C-205ENST00000527020 CXCR3P49682 368 aa18■□□□□ 0.47
USH1C-205ENST00000527020 GALNT2Q10471 571 aa18■□□□□ 0.47
USH1C-205ENST00000527020 TAF1CQ15572 869 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 GDF6Q6KF10 455 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 C17orf99Q6UX52 265 aa18■□□□□ 0.47
USH1C-205ENST00000527020 PDZD4Q76G19 769 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 DPF3Q92784 378 aa18■□□□□ 0.47
USH1C-205ENST00000527020 N4BP2L2Q92802 583 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 HDAC11Q96DB2 347 aa18■□□□□ 0.47
USH1C-205ENST00000527020 APBA2Q99767 749 aa18■□□□□ 0.47
USH1C-205ENST00000527020 EBF4Q9BQW3 602 aa18■□□□□ 0.47
USH1C-205ENST00000527020 SENP6Q9GZR1 1112 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 WWP1Q9H0M0 922 aa18■□□□□ 0.47
USH1C-205ENST00000527020 CSNK1G1Q9HCP0 422 aa18■□□□□ 0.47
USH1C-205ENST00000527020 ZFATQ9P243 1243 aa18■□□□□ 0.47
USH1C-205ENST00000527020 LYPLA1O75608 230 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 PROCP04070 461 aa18■□□□□ 0.47
USH1C-205ENST00000527020 C6orf222P0C671 652 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 GP5P40197 560 aa18■□□□□ 0.47
USH1C-205ENST00000527020 UPP1Q16831 310 aa18■□□□□ 0.47
USH1C-205ENST00000527020 TMEM135Q86UB9 458 aa18■□□□□ 0.47
USH1C-205ENST00000527020 ZSCAN18Q8TBC5 510 aaPredicted RBP18■□□□□ 0.47
USH1C-205ENST00000527020 MYLPFQ96A32 169 aa18■□□□□ 0.47
USH1C-205ENST00000527020 SMARCD1Q96GM5 515 aa18■□□□□ 0.47
USH1C-205ENST00000527020 GBA3Q9H227 469 aa18■□□□□ 0.47
USH1C-205ENST00000527020 PPARGC1AQ9UBK2 798 aaKnown RBP18■□□□□ 0.47
USH1C-205ENST00000527020 DCDC2Q9UHG0 476 aa18■□□□□ 0.47
USH1C-205ENST00000527020 FNDC1Q4ZHG4 1894 aaPredicted RBP17.99■□□□□ 0.47
USH1C-205ENST00000527020 BPTFQ12830 3046 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 ZCWPW2A0A1B0GU75 182 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 M0QZ92 97 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 NCAM2O15394 837 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 F7P08709 466 aaPredicted RBP17.99■□□□□ 0.47
USH1C-205ENST00000527020 KCNA4P22459 653 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 MAGEA12P43365 314 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 INTS6LQ5JSJ4 861 aaKnown RBP17.99■□□□□ 0.47
USH1C-205ENST00000527020 FBXO27Q8NI29 283 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 ISL2Q96A47 359 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 ZNF669Q96BR6 464 aaPredicted RBP17.99■□□□□ 0.47
USH1C-205ENST00000527020 CPNE1Q99829 537 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 TKTL2Q9H0I9 626 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 LRRC40Q9H9A6 602 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 AGO3Q9H9G7 860 aaKnown RBP17.99■□□□□ 0.47
USH1C-205ENST00000527020 TMEM216Q9P0N5 145 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 VANGL2Q9ULK5 521 aa17.99■□□□□ 0.47
USH1C-205ENST00000527020 LRIG2O94898 1065 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 ARRB2P32121 409 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 GARSP41250 739 aaKnown RBP17.98■□□□□ 0.47
USH1C-205ENST00000527020 PDE1BQ01064 536 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 KHDC1Q4VXA5 237 aaKnown RBP17.98■□□□□ 0.47
USH1C-205ENST00000527020 TAC4Q86UU9 113 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 RBBP8Q99708 897 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 CCDC106Q9BWC9 280 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 CHST12Q9NRB3 414 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 RRN3Q9NYV6 651 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 OR12D3Q9UGF7 316 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 GIT1Q9Y2X7 761 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 DUSP11O75319 330 aaKnown RBP17.98■□□□□ 0.47
USH1C-205ENST00000527020 AKR1A1P14550 325 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 CPA2P48052 419 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 MGAT3Q09327 533 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 TUBB3Q13509 450 aa17.98■□□□□ 0.47
USH1C-205ENST00000527020 FRG1Q14331 258 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms