RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 IGKV6-21A0A0C4DH24 114 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 KBTBD13C9JR72 458 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 ABLIM1O14639 778 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 SNX3O60493 162 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 LPXNO60711 386 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 CPA2P48052 419 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 THOC5Q13769 683 aaKnown RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 ITIH4Q14624 930 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 ARHGEF6Q15052 776 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 RFWD3Q6PCD5 774 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 AGR3Q8TD06 166 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 CAPSLQ8WWF8 208 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 NACC2Q96BF6 587 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 TRIM56Q9BRZ2 755 aaKnown RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 RETREG1Q9H6L5 497 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 XAB2Q9HCS7 855 aaKnown RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 KRT82Q9NSB4 513 aa10.12□□□□□ -0.79
USP35-201ENST00000526425 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
USP35-201ENST00000526425 SEC24DO94855 1032 aaPredicted RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 CAPN1P07384 714 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 ABCG1P45844 678 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 NR1D2Q14995 579 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 CYP1B1Q16678 543 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 CTC1Q2NKJ3 1217 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 FNBP1LQ5T0N5 605 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 PCGF5Q86SE9 256 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 HEATR4Q86WZ0 1026 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 ARHGAP24Q8N264 748 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 DEPDC4Q8N2C3 294 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 ZCCHC9Q8N567 271 aaKnown RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 SLC25A41Q8N5S1 370 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 EMID1Q96A84 441 aaPredicted RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 CAPNS2Q96L46 248 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 KLHL4Q9C0H6 718 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 XPNPEP3Q9NQH7 507 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 AAASQ9NRG9 546 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 DDIT4Q9NX09 232 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 DDX43Q9NXZ2 648 aaKnown RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 SATB2Q9UPW6 733 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 FNDC3AQ9Y2H6 1198 aaKnown RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 PCDHGA3Q9Y5H0 932 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 WASF2Q9Y6W5 498 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 CEP350Q5VT06 3117 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 SMIM28A0A1B0GU29 152 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 COPEO14579 308 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 RPA3P35244 121 aaPredicted RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 GPD2P43304 727 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 NDUFV1P49821 464 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 SCNN1GP51170 649 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 PHEXP78562 749 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 SLC6A3Q01959 620 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 GBE1Q04446 702 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 MORF4L2Q15014 288 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 TMEM259Q4ZIN3 620 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 BOLA3Q53S33 107 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 FLCNQ8NFG4 579 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 FAM111AQ96PZ2 611 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 MTG1Q9BT17 334 aaPredicted RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.11□□□□□ -0.79
USP35-201ENST00000526425 IL1RAPL1Q9NZN1 696 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 HBS1LQ9Y450 684 aaKnown RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 PAPPA2Q9BXP8 1791 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 SCN4AP35499 1836 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 MEIS3P2A8K0S8 358 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 TRIM49D1C9J1S8 452 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 FAM155BO75949 473 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 CD4P01730 458 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 LMNAP02545 664 aaKnown RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 SLC4A1P02730 911 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 ZNF143P52747 638 aaPredicted RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 PTP4A2Q12974 167 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 DPYSL3Q14195 570 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 SNX17Q15036 470 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 MORN1Q5T089 497 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 PIGZQ86VD9 579 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 CELF6Q96J87 481 aaKnown RBP10.11□□□□□ -0.79
USP35-201ENST00000526425 LGMNQ99538 433 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 ARHGEF3Q9NR81 526 aa10.11□□□□□ -0.79
USP35-201ENST00000526425 PDLIM1O00151 329 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 AOC2O75106 756 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 USP1O94782 785 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 F7P08709 466 aaPredicted RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 ELNP15502 786 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 GOT1P17174 413 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 GNAZP19086 355 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 TKTL1P51854 596 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 PRKCZQ05513 592 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 STK11Q15831 433 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 GRAMD1BQ3KR37 738 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 LGSNQ5TDP6 509 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 KCNT2Q6UVM3 1135 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 SCAIQ8N9R8 606 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 ZIC5Q96T25 663 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 TBCBQ99426 244 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 ZNF184Q99676 751 aaPredicted RBP10.1□□□□□ -0.79
USP35-201ENST00000526425 PARVBQ9HBI1 364 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 UCKL1Q9NWZ5 548 aa10.1□□□□□ -0.79
USP35-201ENST00000526425 FLRT1Q9NZU1 646 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms