RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 FAM72BQ86X60 149 aa21.37■■□□□ 1.01
CD44-222ENST00000526025 DONSONQ9NYP3 566 aa21.37■■□□□ 1.01
CD44-222ENST00000526025 KIAA1522Q9P206 1035 aaPredicted RBP21.37■■□□□ 1.01
CD44-222ENST00000526025 RCOR3Q9P2K3 495 aaPredicted RBP21.37■■□□□ 1.01
CD44-222ENST00000526025 MTF2Q9Y483 593 aaPredicted RBP21.37■■□□□ 1.01
CD44-222ENST00000526025 DUSP10Q9Y6W6 482 aa21.37■■□□□ 1.01
CD44-222ENST00000526025 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.36■■□□□ 1.01
CD44-222ENST00000526025 WASH4PA8MWX3 477 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 H0Y626 953 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 STK25O00506 426 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 KRT86O43790 486 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 SRGAP2O75044 1071 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 EGFP01133 1207 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 MAPKAPK2P49137 400 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 IRAK1P51617 712 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 PLK1P53350 603 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 MESP2Q0VG99 397 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 ZNF177Q13360 481 aaPredicted RBP21.36■■□□□ 1.01
CD44-222ENST00000526025 HSF5Q4G112 596 aaPredicted RBP21.36■■□□□ 1.01
CD44-222ENST00000526025 ALFQ53S48 1182 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 CXorf57Q6NSI4 855 aaKnown RBP21.36■■□□□ 1.01
CD44-222ENST00000526025 ZNF783Q6ZMS7 281 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 NLRP14Q86W24 1093 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 AHI1Q8N157 1196 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 PYROXD2Q8N2H3 581 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 CARNMT1Q8N4J0 409 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 WFDC5Q8TCV5 224 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 UBE2Q2Q8WVN8 375 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 EZH1Q92800 747 aaPredicted RBP21.36■■□□□ 1.01
CD44-222ENST00000526025 KCNF1Q9H3M0 494 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 CATSPERBQ9H7T0 1116 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.36■■□□□ 1.01
CD44-222ENST00000526025 TMEM248Q9NWD8 314 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 GGA2Q9UJY4 613 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 ATG2BQ96BY7 2078 aa21.36■■□□□ 1.01
CD44-222ENST00000526025 TBC1D3BA6NDS4 549 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 TMEM110-MUSTN1A8MSY1 372 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 K7EQS6 105 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 NPC1O15118 1278 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 TRIM24O15164 1050 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 PSTPIP1O43586 416 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 CNTN5O94779 1100 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 PABPC1P11940 636 aaKnown RBP21.35■■□□□ 1.01
CD44-222ENST00000526025 COMTP21964 271 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 TAS2R40P59535 323 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 MRPS21P82921 87 aaKnown RBP21.35■■□□□ 1.01
CD44-222ENST00000526025 LMAN2Q12907 356 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 CA9Q16790 459 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 KCNT1Q5JUK3 1230 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 TMEM31Q5JXX7 168 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 C6orf118Q5T5N4 469 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 MAMSTRQ6ZN01 415 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 CIR1Q86X95 450 aaPredicted RBP21.35■■□□□ 1.01
CD44-222ENST00000526025 VSIG1Q86XK7 387 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 KCTD15Q96SI1 283 aaPredicted RBP21.35■■□□□ 1.01
CD44-222ENST00000526025 CHRDQ9H2X0 955 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 ZWILCHQ9H900 591 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 LMAN1LQ9HAT1 526 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 ABCB8Q9NUT2 735 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 GPATCH2LQ9NWQ4 482 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 MPP6Q9NZW5 540 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 DLGAP2Q9P1A6 1054 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 ALG6Q9Y672 507 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 ZNF318Q5VUA4 2279 aa21.35■■□□□ 1.01
CD44-222ENST00000526025 ZNF487B1APH4 448 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 CHURC1-FNTBB4DL54 471 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 H3BRJ5 948 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 EEF2KO00418 725 aaKnown RBP21.34■■□□□ 1.01
CD44-222ENST00000526025 CHRM1P11229 460 aaPredicted RBP21.34■■□□□ 1.01
CD44-222ENST00000526025 EPHB2P29323 1055 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 SSR1P43307 286 aaKnown RBP21.34■■□□□ 1.01
CD44-222ENST00000526025 ARSEP51690 589 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 TPI1P60174 286 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 PDK2Q15119 407 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 GEN1Q17RS7 908 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 SMTNL2Q2TAL5 461 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 FSCBQ5H9T9 825 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 TXNRD3NBQ6F5E7 133 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 RWDD4Q6NW29 188 aaKnown RBP21.34■■□□□ 1.01
CD44-222ENST00000526025 DAAM2Q86T65 1068 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 CPNE8Q86YQ8 564 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 RHOT1Q8IXI2 618 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 RTL3Q8N8U3 475 aaKnown RBP21.34■■□□□ 1.01
CD44-222ENST00000526025 LRRC57Q8N9N7 239 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 TSC1Q92574 1164 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 MAGEB5Q9BZ81 275 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 PPP2R2CQ9Y2T4 447 aa21.34■■□□□ 1.01
CD44-222ENST00000526025 MUC22E2RYF6 1773 aaPredicted RBP21.33■■□□□ 1.01
CD44-222ENST00000526025 ILVBLA1L0T0 632 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 BUB1O43683 1085 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 SPOPO43791 374 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 CREB3O43889 395 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 MOCS3O95396 460 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 OR1E1P30953 314 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 CD70P32970 193 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 ARL4AP40617 200 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 KIR2DL1P43626 348 aaPredicted RBP21.33■■□□□ 1.01
CD44-222ENST00000526025 NUBP1P53384 320 aa21.33■■□□□ 1.01
CD44-222ENST00000526025 NAP1L1P55209 391 aaKnown RBP21.33■■□□□ 1.01
CD44-222ENST00000526025 RFX8Q6ZV50 586 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms