RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 NCAM2O15394 837 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 PALMO75781 387 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 MSNP26038 577 aaKnown RBP19.25■□□□□ 0.67
PTPRK-218ENST00000525459 CTNNA1P35221 906 aaKnown RBP19.25■□□□□ 0.67
PTPRK-218ENST00000525459 ETFBP38117 255 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 LRRC32Q14392 662 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 DMC1Q14565 340 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 CA9Q16790 459 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 FAM72AQ5TYM5 149 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 TXNRD3NBQ6F5E7 133 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 FAM72DQ6L9T8 149 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 RFX8Q6ZV50 586 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 FAM72BQ86X60 149 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 AHI1Q8N157 1196 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 NAT16Q8N8M0 369 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 KCTD6Q8NC69 237 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 MYEOVQ96EZ4 313 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 COL25A1Q9BXS0 654 aaPredicted RBP19.25■□□□□ 0.67
PTPRK-218ENST00000525459 MFSD1Q9H3U5 465 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 PCDH18Q9HCL0 1135 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 KIAA1522Q9P206 1035 aaPredicted RBP19.25■□□□□ 0.67
PTPRK-218ENST00000525459 SNX10Q9Y5X0 201 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 A0A0A0MRY4 1105 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 DAPK3O43293 454 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 KAT7O95251 611 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 CTNNA2P26232 953 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 PON2Q15165 354 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 DGKKQ5KSL6 1271 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 TXNDC11Q6PKC3 985 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 NT5DC3Q86UY8 548 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 KATNAL2Q8IYT4 538 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 PHTF2Q8N3S3 785 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 RTL3Q8N8U3 475 aaKnown RBP19.25■□□□□ 0.67
PTPRK-218ENST00000525459 GOLPH3Q9H4A6 298 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 TBC1D17Q9HA65 648 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 PRDM16Q9HAZ2 1276 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 LTB4R2Q9NPC1 389 aa19.25■□□□□ 0.67
PTPRK-218ENST00000525459 OR1E1P30953 314 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 GALK1P51570 392 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 ALFQ53S48 1182 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 IER5LQ5T953 404 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 NLRP14Q86W24 1093 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 CPNE8Q86YQ8 564 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 SYNPOQ8N3V7 929 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 UBL4BQ8N7F7 174 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 TSC1Q92574 1164 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 TRIM44Q96DX7 344 aaPredicted RBP19.24■□□□□ 0.67
PTPRK-218ENST00000525459 RBM41Q96IZ5 413 aaKnown RBP19.24■□□□□ 0.67
PTPRK-218ENST00000525459 CALN1Q9BXU9 219 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 MPP6Q9NZW5 540 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 GGA2Q9UJY4 613 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 PCDHA3Q9Y5H8 950 aa19.24■□□□□ 0.67
PTPRK-218ENST00000525459 LRRD1A4D1F6 860 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 CNTN5O94779 1100 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 KRT1P04264 644 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 CISD3P0C7P0 127 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 PABPC1P11940 636 aaKnown RBP19.23■□□□□ 0.67
PTPRK-218ENST00000525459 GOT1P17174 413 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 HLA-FP30511 346 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 MAGEA9P43362 315 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 TNFRSF4P43489 277 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 ARSEP51690 589 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 KDSRQ06136 332 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 DPYSL3Q14195 570 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 ARTNQ5T4W7 220 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 KIAA0907Q7Z7F0 614 aaPredicted RBP19.23■□□□□ 0.67
PTPRK-218ENST00000525459 CIR1Q86X95 450 aaPredicted RBP19.23■□□□□ 0.67
PTPRK-218ENST00000525459 REXO1L1PQ8IX06 675 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 KCNV2Q8TDN2 545 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 P2RY11Q96G91 374 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 IER2Q9BTL4 223 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 KCND1Q9NSA2 647 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 ABCB8Q9NUT2 735 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 CWC15Q9P013 229 aaKnown RBP19.23■□□□□ 0.67
PTPRK-218ENST00000525459 ZNF212Q9UDV6 495 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 HYOU1Q9Y4L1 999 aa19.23■□□□□ 0.67
PTPRK-218ENST00000525459 MUC22E2RYF6 1773 aaPredicted RBP19.23■□□□□ 0.67
PTPRK-218ENST00000525459 ILVBLA1L0T0 632 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 TMEM221A6NGB7 291 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 SHISA7A6NL88 538 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 M0R296 226 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 TIMM44O43615 452 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 RHOCP08134 193 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 KDELR1P24390 212 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 SERPINB6P35237 376 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 SLC6A11P48066 632 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 IRAK1P51617 712 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 DPYSQ14117 519 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 CXorf57Q6NSI4 855 aaKnown RBP19.22■□□□□ 0.67
PTPRK-218ENST00000525459 TFAP2DQ7Z6R9 452 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 LZTR1Q8N653 840 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 PJA1Q8NG27 643 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 EXD1Q8NHP7 514 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 UCMAQ8WVF2 138 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 NUP205Q92621 2012 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 CSPG4P5Q96PW8 444 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 NYNRINQ9P2P1 1898 aaKnown RBP19.22■□□□□ 0.67
PTPRK-218ENST00000525459 PYCARDQ9ULZ3 195 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 TBC1D3BA6NDS4 549 aa19.22■□□□□ 0.67
PTPRK-218ENST00000525459 NPC1O15118 1278 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms