RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IGLV3-19P01714 112 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 DNTTP04053 509 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 PDGFRAP16234 1089 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 GABRB2P47870 512 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 SULT1E1P49888 294 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 RPS14P62263 151 aaKnown RBP19.15■□□□□ 0.66
CAPN1-203ENST00000525013 ECT2LQ008S8 904 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 CENPCQ03188 943 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 MTA1Q13330 715 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 AUHQ13825 339 aaKnown RBP19.15■□□□□ 0.66
CAPN1-203ENST00000525013 PLEKHG6Q3KR16 790 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 TTC39BQ5VTQ0 682 aaPredicted RBP19.15■□□□□ 0.66
CAPN1-203ENST00000525013 PSAPL1Q6NUJ1 521 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 SND1Q7KZF4 910 aaKnown RBP eCLIP19.15■□□□□ 0.66
CAPN1-203ENST00000525013 XYLT1Q86Y38 959 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 DHX40Q8IX18 779 aaKnown RBP19.15■□□□□ 0.66
CAPN1-203ENST00000525013 APCDD1Q8J025 514 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 CADM4Q8NFZ8 388 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 EPS8L1Q8TE68 723 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 SLC20A1Q8WUM9 679 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 MYO19Q96H55 970 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 SPAG5Q96R06 1193 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 NPY6RQ99463 290 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 MIR1-1HGQ9H1L0 117 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 CAPN10Q9HC96 672 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 SUSD2Q9UGT4 822 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 A0A1B0GVM2 712 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 TCAF2A6NFQ2 919 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 TFE3P19532 575 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-203ENST00000525013 SOX5P35711 763 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 GGCXP38435 758 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 NOVA1P51513 510 aaKnown RBP19.14■□□□□ 0.65
CAPN1-203ENST00000525013 UBXN1Q04323 297 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 SYCP1Q15431 976 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 HNRNPA1L2Q32P51 320 aaKnown RBP19.14■□□□□ 0.65
CAPN1-203ENST00000525013 TTC31Q49AM3 519 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-203ENST00000525013 N4BP2L1Q5TBK1 243 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-203ENST00000525013 DCAF12L1Q5VU92 463 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 ZNF776Q68DI1 518 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-203ENST00000525013 ZNF677Q86XU0 584 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 GANCQ8TET4 914 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 IGSF8Q969P0 613 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 MRGPRX3Q96LB0 322 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 WDCPQ9H6R7 721 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 PIGVQ9NUD9 493 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 LIMA1Q9UHB6 759 aaKnown RBP19.14■□□□□ 0.65
CAPN1-203ENST00000525013 SLCO3A1Q9UIG8 710 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 HS3ST4Q9Y661 456 aa19.14■□□□□ 0.65
CAPN1-203ENST00000525013 LGALS16A8MUM7 142 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 METTL12A8MUP2 240 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 TTC34A8MYJ7 566 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 ARHGAP33O14559 1287 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 EPHB6O15197 1021 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 RNASEH1O60930 286 aaKnown RBP19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SIN3BO75182 1162 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 ADCY5O95622 1261 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SRPRAP08240 638 aaKnown RBP19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SYPP08247 313 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 MZF1P28698 734 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SCNN1AP37088 669 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 CXCR3P49682 368 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 OXCT1P55809 520 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 NOMO3P69849 1222 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 CDR2Q01850 454 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 ZBTB16Q05516 673 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 DEUP1Q05D60 604 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SLC12A1Q13621 1099 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SH3PXD2AQ5TCZ1 1133 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 OTUD1Q5VV17 481 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-203ENST00000525013 ZCCHC9Q8N567 271 aaKnown RBP19.13■□□□□ 0.65
CAPN1-203ENST00000525013 KDM1BQ8NB78 822 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 NEK11Q8NG66 645 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 DNASE2BQ8WZ79 361 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SNX19Q92543 992 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 RPL10LQ96L21 214 aaKnown RBP19.13■□□□□ 0.65
CAPN1-203ENST00000525013 TBCBQ99426 244 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 ADAM33Q9BZ11 813 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 TKTL2Q9H0I9 626 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 NOCTQ9UK39 431 aaKnown RBP19.13■□□□□ 0.65
CAPN1-203ENST00000525013 SIK3Q9Y2K2 1263 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 PAXBP1Q9Y5B6 917 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 PCDH15Q96QU1 1955 aa19.13■□□□□ 0.65
CAPN1-203ENST00000525013 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-203ENST00000525013 EDDM13A0A1B0GTR0 161 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 GIPC1O14908 333 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 F9P00740 461 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 ZNF18P17022 549 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 ACSL1P33121 698 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 NNMTP40261 264 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 STAT1P42224 750 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 STK19P49842 368 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-203ENST00000525013 IRAK1P51617 712 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 JAM2P57087 298 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 TYRO3Q06418 890 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 ZNF177Q13360 481 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-203ENST00000525013 SLC25A52Q3SY17 297 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 BRMS1LQ5PSV4 323 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 C14orf80Q86SX3 495 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 HDDC3Q8N4P3 179 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 OR2I1PQ8NGU4 316 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms