RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 MNS1Q8NEH6 495 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 P3H4Q92791 437 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 ATP2A3Q93084 1043 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 AP1M1Q9BXS5 423 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 LINC00597Q9H2U6 94 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 RETREG1Q9H6L5 497 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 SPHK2Q9NRA0 654 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 NUMBLQ9Y6R0 609 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 DOCK8Q8NF50 2099 aa16.29■□□□□ 0.2
TSPAN4-213ENST00000524895 XIRP2A4UGR9 3374 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ANHXE9PGG2 379 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 NFATC1O95644 943 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ADH1CP00326 375 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 PECAM1P16284 738 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 OR1E1P30953 314 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 NR2C2P49116 596 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 OTUD4Q01804 1114 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 TFF2Q03403 129 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 GBE1Q04446 702 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ZNF177Q13360 481 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ANO4Q32M45 955 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 EML3Q32P44 896 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 MPP7Q5T2T1 576 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 TRIM68Q6AZZ1 485 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 NPNTQ6UXI9 565 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 TMEM25Q86YD3 366 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 CARNMT1Q8N4J0 409 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 LZTR1Q8N653 840 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 NPWQ8N729 165 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 CEP112Q8N8E3 955 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 IRF7Q92985 503 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ASIC4Q96FT7 647 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 ZFYVE19Q96K21 471 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 BBS2Q9BXC9 721 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 PLA2G2FQ9BZM2 168 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 L2HGDHQ9H9P8 463 aa16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 SAE1Q9UBE0 346 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 R3HDM2Q9Y2K5 976 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 KIF26AQ9ULI4 1882 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-213ENST00000524895 NEDD8-MDP1E9PL57 170 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 H0Y626 953 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 MCF2LO15068 1137 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 LUC7L3O95232 432 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 CYP17A1P05093 508 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 HOXD9P28356 352 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 CDH18Q13634 790 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 SIX1Q15475 284 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 LY6G5CQ5SRR4 150 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 C6orf118Q5T5N4 469 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 FYB2Q5VWT5 728 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 BZW1Q7L1Q6 419 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 ZNF572Q7Z3I7 529 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 MFN1Q8IWA4 741 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 ADGRG2Q8IZP9 1017 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 C1orf54Q8WWF1 131 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 ATG4AQ8WYN0 398 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 CELF6Q96J87 481 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 FAM118BQ9BPY3 351 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 FAM83CQ9BQN1 747 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 TRMT61BQ9BVS5 477 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 FRMD8P1Q9BZ68 369 aaPredicted RBP16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 EBF3Q9H4W6 596 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 PRDM6Q9NQX0 595 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 HOMER3Q9NSC5 361 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 PLK2Q9NYY3 685 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 DTLQ9NZJ0 730 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 MARK1Q9P0L2 795 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 ZNF212Q9UDV6 495 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 RAD54BQ9Y620 910 aa16.27■□□□□ 0.2
TSPAN4-213ENST00000524895 EYSQ5T1H1 3165 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 CTAGE15A4D2H0 777 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 CCDC188H7C350 402 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 DFFAO00273 331 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 RAMP2O60895 175 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 MAP3K6O95382 1288 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 PENKP01210 267 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 RHOCP08134 193 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 CTAGE8P0CG41 777 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 ADH5P11766 374 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 IL9P15248 144 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 ARSAP15289 507 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 GDI1P31150 447 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 NDST2P52849 883 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 NOMO1Q15155 1222 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 DHCR24Q15392 516 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 RHBDF2Q6PJF5 856 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 SETD3Q86TU7 594 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 CTAGE6Q86UF2 777 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 CTAGE4Q8IX94 777 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 UMODL1-AS1Q8N2C9 162 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 CPA6Q8N4T0 437 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 PRELID2Q8N945 189 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 SPATA4Q8NEY3 305 aa16.26■□□□□ 0.19
TSPAN4-213ENST00000524895 CARD6Q9BX69 1037 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms