RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 GRM3Q14832 879 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 SLC39A5Q6ZMH5 540 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 LRRC49Q8IUZ0 686 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.42■□□□□ 0.38
BEST1-203ENST00000524877 MAN1C1Q9NR34 630 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 UBP1Q9NZI7 540 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 SMG5Q9UPR3 1016 aaKnown RBP17.42■□□□□ 0.38
BEST1-203ENST00000524877 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 WDR59Q6PJI9 974 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 SHDQ96IW2 340 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 CEP19Q96LK0 163 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 PCDHB9Q9Y5E1 797 aa17.42■□□□□ 0.38
BEST1-203ENST00000524877 C5orf58C9J3I9 102 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 F2P00734 622 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 MAGOHP61326 146 aaKnown RBP17.41■□□□□ 0.38
BEST1-203ENST00000524877 IRGQQ8WZA9 623 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 OMA1Q96E52 524 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 APOL2Q9BQE5 337 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 ERP44Q9BS26 406 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 SYTL2Q9HCH5 934 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 FGFR1OP2Q9NVK5 253 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.41■□□□□ 0.38
BEST1-203ENST00000524877 CFAP73A6NFT4 308 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 KLRC4O43908 158 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 ABCE1P61221 599 aaKnown RBP17.41■□□□□ 0.38
BEST1-203ENST00000524877 OTOP3Q7RTS5 596 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 C9orf72Q96LT7 481 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 ST6GALNAC4Q9H4F1 302 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 OSGEPQ9NPF4 335 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 NRP1O14786 923 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 HNRNPH1P31943 449 aaKnown RBP17.41■□□□□ 0.38
BEST1-203ENST00000524877 BADQ92934 168 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 RBM12Q9NTZ6 932 aaKnown RBP17.41■□□□□ 0.38
BEST1-203ENST00000524877 RIC8BQ9NVN3 520 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 ITGA9Q13797 1035 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 CCNG2Q16589 344 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 C17orf50Q8WW18 174 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 ASPSCR1Q9BZE9 553 aa17.41■□□□□ 0.38
BEST1-203ENST00000524877 COL22A1Q8NFW1 1626 aaPredicted RBP17.41■□□□□ 0.38
BEST1-203ENST00000524877 TIMM44O43615 452 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 APOA4P06727 396 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 WARSP23381 471 aaKnown RBP17.4■□□□□ 0.38
BEST1-203ENST00000524877 AIF1P55008 147 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 ERVK-21P61565 698 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 KCTD10Q9H3F6 313 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 RGS18Q9NS28 235 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 SYCE1LA8MT33 242 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 GJA8P48165 433 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 NPY2RP49146 381 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 KLC1Q07866 573 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 RAD9AQ99638 391 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 FAM237AA0A1B0GTK4 181 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 PER2O15055 1255 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 ARHGDIAP52565 204 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 TP53BP2Q13625 1128 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 C12orf29Q8N999 325 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 ZNF483Q8TF39 744 aaPredicted RBP17.4■□□□□ 0.38
BEST1-203ENST00000524877 ATG4AQ8WYN0 398 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 MTBPQ96DY7 904 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 SERAC1Q96JX3 654 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 KANSL1LA0AUZ9 987 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 SLC38A8A6NNN8 435 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 PDE5AO76074 875 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 SERPINB8P50452 374 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 HHIPL1Q96JK4 782 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 PRPF18Q99633 342 aaKnown RBP17.4■□□□□ 0.38
BEST1-203ENST00000524877 RAD51CO43502 376 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 GAD2Q05329 585 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 FAM124AQ86V42 546 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.4■□□□□ 0.38
BEST1-203ENST00000524877 ZNF229Q9UJW7 825 aa17.4■□□□□ 0.38
BEST1-203ENST00000524877 TMA7Q9Y2S6 64 aaKnown RBP17.4■□□□□ 0.38
BEST1-203ENST00000524877 CORO1AP31146 461 aaKnown RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 SLC5A3P53794 718 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 XRCC4Q13426 336 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 UBXN2BQ14CS0 331 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 PPP1R15BQ5SWA1 713 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 KAT2BQ92831 832 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 OTUB1Q96FW1 271 aaPredicted RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 HIC2Q96JB3 615 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 TMEM121Q9BTD3 319 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 DKK3Q9UBP4 350 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 GOLGA8RI6L899 631 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 CES1P23141 567 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 MRPS35P82673 323 aaKnown RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 PTAR1Q7Z6K3 402 aaPredicted RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 CCDC124Q96CT7 223 aaKnown RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 SIKE1Q9BRV8 207 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 POLMQ9NP87 494 aaPredicted RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 GRID1Q9ULK0 1009 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 TDRKHQ9Y2W6 561 aaKnown RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 MRPL42Q9Y6G3 142 aaKnown RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 HNRNPCL2B2RXH8 293 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 MEFVO15553 781 aaPredicted RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 HNRNPCL1O60812 293 aaKnown RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 KRT4P19013 534 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 MATKP42679 507 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 C1QTNF8P60827 252 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 FOXD4Q12950 439 aaPredicted RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 FAM71AQ8IYT1 594 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms