RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 CAPN2P17655 700 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 RPS12P25398 132 aaKnown RBP4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 HOXD10P28358 340 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 ID2Q02363 134 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 SEMA3AQ14563 771 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 LARS2Q15031 903 aaKnown RBP4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 PTCHD3Q3KNS1 767 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 CRY2Q49AN0 593 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 TMEM63BQ5T3F8 832 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 TMTC4Q5T4D3 741 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 PTCHD4Q6ZW05 846 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 ADSSL1Q8N142 457 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 KRT78Q8N1N4 520 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 SLC15A4Q8N697 577 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 ARFGAP1Q8N6T3 406 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 BADQ92934 168 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 PPP2R3CQ969Q6 453 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 ZFYVE19Q96K21 471 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 RTFDC1Q9BY42 306 aaPredicted RBP4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 TRIM54Q9BYV2 358 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 VPS33BQ9H267 617 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 GABBR1Q9UBS5 961 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 LPAR3Q9UBY5 353 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 PNMA8BQ9ULN7 279 aaPredicted RBP4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 LRRC37AA6NMS7 1700 aa4.58□□□□□ -1.68
NSMCE2-211ENST00000523549 CCL15-CCL14A0A0B4J2E2 113 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 H3BML4 177 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 GTPBP1O00178 669 aaKnown RBP4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 AP1G1O43747 822 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 NCLP19338 710 aaKnown RBP4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 HTR1BP28222 390 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 ME1P48163 572 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 COPB1P53618 953 aaKnown RBP4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 SUMO2P61956 95 aaKnown RBP4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 KRT17Q04695 432 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 CCL15Q16663 113 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 UBAP2Q5T6F2 1119 aaKnown RBP4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 LMBRD2Q68DH5 695 aaPredicted RBP4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 DENND1CQ8IV53 801 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 BPIFB1Q8TDL5 484 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 WIPF2Q8TF74 440 aaPredicted RBP4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 TMEM171Q8WVE6 324 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 KBTBD7Q8WVZ9 684 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 GPATCH3Q96I76 525 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 RHOBTB2Q9BYZ6 727 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 DPH1Q9BZG8 443 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 HS3ST3B1Q9Y662 390 aa4.57□□□□□ -1.68
NSMCE2-211ENST00000523549 MYO9AB2RTY4 2548 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 WDFY3Q8IZQ1 3526 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 IGF2RP11717 2491 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 NUP98P52948 1817 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 EVC2Q86UK5 1308 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 FGF2P09038 288 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 CT47B1P0C2W7 299 aaPredicted RBP4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 DIO1P49895 249 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 BCAT1P54687 386 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 CTBP1Q13363 440 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 SLC39A6Q13433 755 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 CCNIQ14094 377 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 PLA1AQ53H76 456 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 RANBP10Q6VN20 620 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 ZNF783Q6ZMS7 281 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 PIM3Q86V86 326 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 RAB11FIP4Q86YS3 637 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 PELI3Q8N2H9 469 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 OPTNQ96CV9 577 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 AIFM3Q96NN9 605 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 MYOZ2Q9NPC6 264 aa4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 DRG1Q9Y295 367 aaKnown RBP4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 NOP58Q9Y2X3 529 aaKnown RBP4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 COL4A4P53420 1690 aaPredicted RBP4.56□□□□□ -1.68
NSMCE2-211ENST00000523549 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 PSMD9O00233 223 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 BTN3A1O00481 513 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 SPRY2O43597 315 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 ALDH1L1O75891 902 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 UBXN7O94888 489 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 PRKAG1P54619 331 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 PIN1Q13526 163 aaPredicted RBP4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 MLC1Q15049 377 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 NPY5RQ15761 445 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 CERCAMQ5T4B2 595 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 ANO7Q6IWH7 933 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 TMEM65Q6PI78 240 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 C17orf99Q6UX52 265 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 B3GNT9Q6UX72 402 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 DAAM2Q86T65 1068 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 OR6B3Q8NGW1 331 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 HERVK_113Q902F9 699 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 KAZALD1Q96I82 304 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 NT5C1BQ96P26 610 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 FSD1Q9BTV5 496 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 TRMOQ9BU70 441 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 TRIM5Q9C035 493 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 HIPK2Q9H2X6 1198 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 XPNPEP3Q9NQH7 507 aa4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 TYW1Q9NV66 732 aaKnown RBP4.55□□□□□ -1.68
NSMCE2-211ENST00000523549 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms