RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 RNPEPL1Q9HAU8 725 aa11.03□□□□□ -0.64
RAB11FIP1-204ENST00000522774 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ZFATQ9P243 1243 aa11.03□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CDH9Q9ULB4 789 aa11.03□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SCN10AQ9Y5Y9 1956 aa11.02□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PLIN3O60664 434 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 HNRNPCL1O60812 293 aaKnown RBP11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 AP2A1O95782 977 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 PGK1P00558 417 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 POLBP06746 335 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 AKR1A1P14550 325 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CPA2P48052 419 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 STX3Q13277 289 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 KRT72Q14CN4 511 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 UPP1Q16831 310 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 MBLAC2Q68D91 279 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 KYAT3Q6YP21 454 aaKnown RBP11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 RASAL3Q86YV0 1011 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CRLF3Q8IUI8 442 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CCNJLQ8IV13 435 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 HASPINQ8TF76 798 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 AZIN2Q96A70 460 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ATXN7L3BQ96GX2 97 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ZNF778Q96MU6 729 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 APOL2Q9BQE5 337 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TKTL2Q9H0I9 626 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TMLHEQ9NVH6 421 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ZNF358Q9NW07 568 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TAS2R1Q9NYW7 299 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 PTCH2Q9Y6C5 1203 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GSC2O15499 205 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 MGEA5O60502 916 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 FGF3P11487 239 aaPredicted RBP11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 BDNFP23560 247 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ABCG1P45844 678 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 BRCC3P46736 316 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 AIF1P55008 147 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 PDE1BQ01064 536 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CMC1Q7Z7K0 106 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TAC4Q86UU9 113 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 RAB3IL1Q8TBN0 382 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ACMSDQ8TDX5 336 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ZNF669Q96BR6 464 aaPredicted RBP11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CELF6Q96J87 481 aaKnown RBP11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 EBF4Q9BQW3 602 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 NAT9Q9BTE0 207 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 WDCPQ9H6R7 721 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 PPARGC1AQ9UBK2 798 aaKnown RBP11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 OR12D3Q9UGF7 316 aa11.02□□□□□ -0.65
RAB11FIP1-204ENST00000522774 H0Y3Z8 333 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TNPO2O14787 897 aaKnown RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GYG2O15488 501 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GLRA3O75311 464 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 LRIG2O94898 1065 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 POMCP01189 267 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ESRRAP11474 423 aaPredicted RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 NFKB1P19838 968 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CALB2P22676 271 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ZNF157P51786 506 aaPredicted RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 PCLAFQ15004 111 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CERCAMQ5T4B2 595 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 KCTD11Q693B1 232 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 C4orf50Q6ZRC1 276 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 PDZD4Q76G19 769 aaPredicted RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 FBXO27Q8NI29 283 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ZNF570Q96NI8 536 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 NUDCD1Q96RS6 583 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TMEM209Q96SK2 561 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 AGAP2Q99490 1192 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 UBP1Q9NZI7 540 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 VANGL2Q9ULK5 521 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CAPN14A8MX76 684 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 DUSP11O75319 330 aaKnown RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TPBGLP0DKB5 382 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GNAZP19086 355 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GP5P40197 560 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GARSP41250 739 aaKnown RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 HCAR3P49019 387 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CXCR3P49682 368 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GALNT2Q10471 571 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 NAB1Q13506 487 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 SPANXN3Q5MJ09 141 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 WASHC2DQ5SRD0 308 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TEDDM1Q5T9Z0 273 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 FAM91A1Q658Y4 838 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 DNAAF3Q8N9W5 541 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 PPP1R14CQ8TAE6 165 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 N4BP2L2Q92802 583 aaPredicted RBP11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TUBB6Q9BUF5 446 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GBA3Q9H227 469 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 LRRC40Q9H9A6 602 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CSNK1G1Q9HCP0 422 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 CASS4Q9NQ75 786 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 THAP1Q9NVV9 213 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 TMEM216Q9P0N5 145 aa11.01□□□□□ -0.65
RAB11FIP1-204ENST00000522774 GIT1Q9Y2X7 761 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms