RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 A0A1W2PQD8 194 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CACNG3O60359 315 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
PVT1-213ENST00000522414 GTF2H1P32780 548 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 PMS1P54277 932 aaKnown RBP8.4□□□□□ -1.06
PVT1-213ENST00000522414 RPL6Q02878 288 aaKnown RBP8.4□□□□□ -1.06
PVT1-213ENST00000522414 HYAL2Q12891 473 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 LRMPQ12912 555 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 MSMPQ1L6U9 139 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CBWD6Q4V339 395 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CBWD3Q5JTY5 395 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CBWD5Q5RIA9 395 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 DAB2IPQ5VWQ8 1189 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 KRT39Q6A163 491 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 ANKRD40Q6AI12 368 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 ISM2Q6H9L7 571 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 SDE2Q6IQ49 451 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 KLHDC10Q6PID8 442 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CBLL1Q75N03 491 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CCDC186Q7Z3E2 898 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 PIGZQ86VD9 579 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 DENND1CQ8IV53 801 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CCDC150Q8NCX0 1101 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 DEFB124Q8NES8 71 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 OR2I1PQ8NGU4 316 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 UBA3Q8TBC4 463 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 IPO4Q8TEX9 1081 aaKnown RBP8.4□□□□□ -1.06
PVT1-213ENST00000522414 TMEM176AQ96HP8 235 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 SPACA7Q96KW9 195 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 XPO6Q96QU8 1125 aaKnown RBP8.4□□□□□ -1.06
PVT1-213ENST00000522414 SCAND2PQ9GZW5 306 aaPredicted RBP8.4□□□□□ -1.06
PVT1-213ENST00000522414 CALCOCO1Q9P1Z2 691 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 LSM7Q9UK45 103 aaKnown RBP8.4□□□□□ -1.06
PVT1-213ENST00000522414 PILRBQ9UKJ0 227 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 CYP8B1Q9UNU6 501 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 PCDHA5Q9Y5H7 936 aa8.4□□□□□ -1.06
PVT1-213ENST00000522414 DMXL2Q8TDJ6 3036 aa8.4□□□□□ -1.07
PVT1-213ENST00000522414 DSPP15924 2871 aaKnown RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 IGHV1OR15-9A0A0B4J2B8 117 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 CETN3O15182 167 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 CALCAP01258 141 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 CFIP05156 583 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 RALAP11233 206 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 ENGP17813 658 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 TRIM21P19474 475 aaKnown RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 MAOBP27338 520 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 COG7P83436 770 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 GOLGA8FQ08AF8 430 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 GOLGA8DPQ0D2H9 430 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 BYSLQ13895 437 aaKnown RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 GEN1Q17RS7 908 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 PREPLQ4J6C6 727 aaPredicted RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 TCERG1LQ5VWI1 586 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 FYB2Q5VWT5 728 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 LYSMD4Q5XG99 296 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 TRMT11Q7Z4G4 463 aaKnown RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 SLC41A1Q8IVJ1 513 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 ZNF276Q8N554 614 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 TRIML1Q8N9V2 468 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 ANKRD52Q8NB46 1076 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 FBXL13Q8NEE6 735 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 SORCS1Q8WY21 1168 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 MRGPRX1Q96LB2 322 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 GTPBP2Q9BX10 602 aaKnown RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 UBXN6Q9BZV1 441 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 PNPLA8Q9NP80 782 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 CLIC5Q9NZA1 410 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 RASAL2Q9UJF2 1139 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 FBXO10Q9UK96 956 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 RALYQ9UKM9 306 aaKnown RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 AGO1Q9UL18 857 aaKnown RBP8.39□□□□□ -1.07
PVT1-213ENST00000522414 STON1Q9Y6Q2 735 aa8.39□□□□□ -1.07
PVT1-213ENST00000522414 TNRC6BQ9UPQ9 1833 aaKnown RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 SLC12A8A0AV02 714 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 TRIM49BA6NDI0 452 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 TSPAN3O60637 253 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 C1QTNF9P0C862 333 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 EPB41P11171 864 aaKnown RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 CEACAM1P13688 526 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 CORO1AP31146 461 aaKnown RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 MXI1P50539 228 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 TKTL1P51854 596 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 MFAP3P55082 362 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 YWHAGP61981 247 aaKnown RBP eCLIP8.38□□□□□ -1.07
PVT1-213ENST00000522414 SHC2P98077 582 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 ZNF33AQ06730 810 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 PDE4CQ08493 712 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 LMAN2Q12907 356 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 GOLGA7BQ2TAP0 167 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 EDRF1Q3B7T1 1238 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 DCAF17Q5H9S7 520 aaPredicted RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 RAB41Q5JT25 222 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 SPDYCQ5MJ68 293 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 TMEM215Q68D42 235 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 ARHGAP17Q68EM7 881 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 PM20D1Q6GTS8 502 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 SLC23A3Q6PIS1 610 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 RSRC2Q7L4I2 434 aaKnown RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 EDEM1Q92611 657 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms