RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 LMNB2Q03252 620 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 OASLQ15646 514 aaKnown RBP21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 ZNF77Q15935 545 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 TP53INP2Q8IXH6 220 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 LZTR1Q8N653 840 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 GRK7Q8WTQ7 553 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 LRRN4Q8WUT4 740 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 MYLIPQ8WY64 445 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 TMEM121Q9BTD3 319 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 KLC2Q9H0B6 622 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 EPC1Q9H2F5 836 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 NDFIP2Q9NV92 336 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 DONSONQ9NYP3 566 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 CDH7Q9ULB5 785 aa21.97■■□□□ 1.11
R3HCC1-208ENST00000522012 ITGAVP06756 1048 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 CHKAP35790 457 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 VIPR2P41587 438 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 MTHFRP42898 656 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 PTGIRP43119 386 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 USP4Q13107 963 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 XRCC4Q13426 336 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 PDK1Q15118 436 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 CCDC85BQ15834 202 aaPredicted RBP21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 FAM217AQ8IXS0 508 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 TDRD5Q8NAT2 981 aaKnown RBP21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 SMARCD2Q92925 531 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 TMA16Q96EY4 203 aaKnown RBP21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 ASB16Q96NS5 453 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 HINFPQ9BQA5 517 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 KIF9Q9HAQ2 790 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 RAD54BQ9Y620 910 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 OBSL1O75147 1896 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 SGK1O00141 431 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 DFFAO00273 331 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 TBL1XO60907 577 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 TCF3P15923 654 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 OR1E1P30953 314 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 CDH4P55283 916 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 JAMLQ86YT9 394 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 CDKL3Q8IVW4 592 aaPredicted RBP21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 CPXM2Q8N436 756 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 CCNYQ8ND76 341 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 TFB1MQ8WVM0 346 aaKnown RBP21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 RSAD2Q8WXG1 361 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 OLFM3Q96PB7 478 aa21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 CDX2Q99626 313 aaPredicted RBP21.96■■□□□ 1.11
R3HCC1-208ENST00000522012 TYW5A2RUC4 315 aaKnown RBP21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 FAM187AA6NFU0 413 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 PPP1R12AO14974 1030 aaPredicted RBP21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 CTIFO43310 598 aaKnown RBP21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 GAS8O95995 478 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 MX2P20592 715 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 GBP2P32456 591 aaPredicted RBP21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 PPP1R7Q15435 360 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 TTC39BQ5VTQ0 682 aaPredicted RBP21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 TPGS1Q6ZTW0 290 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 HJURPQ8NCD3 748 aaPredicted RBP21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 LGMNQ99538 433 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 SLC39A8Q9C0K1 460 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 TBC1D14Q9P2M4 693 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 CD207Q9UJ71 328 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 NOTCH4Q99466 2003 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 CDH23Q9H251 3354 aa21.95■■□□□ 1.1
R3HCC1-208ENST00000522012 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 HACD1B0YJ81 288 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 NCAM2O15394 837 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 CLDN11O75508 207 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 MAPKAPK2P49137 400 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 GALNT2Q10471 571 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 AP1B1Q10567 949 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 ZNF177Q13360 481 aaPredicted RBP21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 SLC45A4Q5BKX6 768 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 CHST9Q7L1S5 443 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 ARHGAP12Q8IWW6 846 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 UMODL1-AS1Q8N2C9 162 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 ALLCQ8N6M5 410 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 FAM71DQ8N9W8 422 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 DDI1Q8WTU0 396 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 SLCO2A1Q92959 643 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 BHMTQ93088 406 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 RSPRY1Q96DX4 576 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 QKIQ96PU8 341 aaKnown RBP eCLIP21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 MYADMQ96S97 322 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 TRIM51Q9BSJ1 452 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 POMKQ9H5K3 350 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 RETREG1Q9H6L5 497 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 ZNF212Q9UDV6 495 aa21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 DMGDHQ9UI17 866 aaKnown RBP21.94■■□□□ 1.1
R3HCC1-208ENST00000522012 UQCRHLA0A096LP55 91 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 A0A1B0GVM2 712 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 BCLAF3A2AJT9 711 aaKnown RBP21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 TCAF2A6NFQ2 919 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 H3BQ06 376 aaPredicted RBP21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 GFRA2O00451 464 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 KCNN4O15554 427 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 HEXIM1O94992 359 aaKnown RBP21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 IFNB1P01574 187 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 UQCRHP07919 91 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 RBL1P28749 1068 aa21.93■■□□□ 1.1
R3HCC1-208ENST00000522012 NDST2P52849 883 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms