RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PCDHA11Q9Y5I1 949 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 HS3ST4Q9Y661 456 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 SDR42E2A6NKP2 422 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 ZBTB24O43167 697 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 UPP2O95045 317 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 VIMP08670 466 aaKnown RBP18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 ZBTB17Q13105 803 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 TEX44Q53QW1 395 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 ARTNQ5T4W7 220 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 GKAP1Q5VSY0 366 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 PRSS55Q6UWB4 352 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 SLC26A11Q86WA9 606 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 LZTR1Q8N653 840 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 GDAP1Q8TB36 358 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 COMMD8Q9NX08 183 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 ATP11BQ9Y2G3 1177 aa18.95■□□□□ 0.62
TRAPPC9-210ENST00000521667 PLXNA3P51805 1871 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 MYO16Q9Y6X6 1858 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 TYROBPO43914 113 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 KRT4P19013 534 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 GBP2P32456 591 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 ALDH7A1P49419 539 aaKnown RBP18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 PSEN1P49768 467 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 TBX4P57082 545 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 IKBKEQ14164 716 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 C1orf53Q5VUE5 145 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 ITPRIPL1Q6GPH6 555 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 LRRC6Q86X45 466 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 CTAGE3PQ8IX95 158 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 PPM1NQ8N819 430 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 DENND1AQ8TEH3 1009 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 DPF3Q92784 378 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 C1orf74Q96LT6 269 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 GORASP1Q9BQQ3 440 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 GBA3Q9H227 469 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 TLR8Q9NR97 1041 aaKnown RBP18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 GGA2Q9UJY4 613 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 CDY1Q9Y6F8 540 aa18.94■□□□□ 0.62
TRAPPC9-210ENST00000521667 E9PAM4 449 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 HSPA1AP0DMV8 641 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 HSPA1BP0DMV9 641 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 TUBP50607 506 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 MLLT6P55198 1093 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 RPL10AP62906 217 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 EFEMP1Q12805 493 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 TAF10Q12962 218 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 DUSP4Q13115 394 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 CNKSR3Q6P9H4 555 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 MICALCLQ6ZW33 695 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 ARHGAP12Q8IWW6 846 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 SEC16BQ96JE7 1060 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 AGAP3Q96P47 875 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 TSGA13Q96PP4 275 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 TRIM56Q9BRZ2 755 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 OLA1Q9NTK5 396 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 TBX21Q9UL17 535 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 WDR27A2RRH5 827 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 DFFAO00273 331 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 AP2A1O95782 977 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 EFEMP2O95967 443 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 CA4P22748 312 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 CD68P34810 354 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 GJA8P48165 433 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 WDR4P57081 412 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 SESN2P58004 480 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 IL9RQ01113 521 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 STEAP4Q687X5 459 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 CASC4Q6P4E1 433 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 CCNJLQ8IV13 435 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 TEKT5Q96M29 485 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 MAGEB18Q96M61 343 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 NSRP1Q9H0G5 558 aaKnown RBP18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 ZNF180Q9UJW8 692 aa18.93■□□□□ 0.62
TRAPPC9-210ENST00000521667 FAM159BA6NKW6 160 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 ERI2A8K979 691 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 CXorf49A8MYA2 514 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 TCP11X1B4DZS4 312 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 SUN1O94901 812 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 ASMTLO95671 621 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 MT-ND3P03897 115 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 CCNCP24863 283 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 MGAT1P26572 445 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 RPA3P35244 121 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 SPARCL1Q14515 664 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 USP41Q3LFD5 358 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 PIK3R6Q5UE93 754 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 CYS1Q717R9 158 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 C14orf80Q86SX3 495 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 CACNA2D3Q8IZS8 1091 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 ATPAF2Q8N5M1 289 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 RTL3Q8N8U3 475 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 FBXO22Q8NEZ5 403 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 ZSCAN18Q8TBC5 510 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 ALKBH8Q96BT7 664 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 PAWRQ96IZ0 340 aaKnown RBP18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 CWH43Q9H720 699 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 SMYD2Q9NRG4 433 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 MTRRQ9UBK8 725 aa18.92■□□□□ 0.62
TRAPPC9-210ENST00000521667 JCHAINP01591 159 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms