RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 PFKFB1P16118 471 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 ZNF18P17022 549 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 MAT2AP31153 395 aaKnown RBP11.91□□□□□ -0.5
MRPS28-206ENST00000520946 SYKP43405 635 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 NXPH1P58417 271 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 DAOAP59103 153 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 CFHR1Q03591 330 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 LRMPQ12912 555 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 CUL2Q13617 745 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 PITRM1Q5JRX3 1037 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 C9orf64Q5T6V5 341 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 NAPEPLDQ6IQ20 393 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 FBXL19Q6PCT2 694 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 ZC3H3Q8IXZ2 948 aaKnown RBP11.91□□□□□ -0.5
MRPS28-206ENST00000520946 CFAP52Q8N1V2 620 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 STK40Q8N2I9 435 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 MFSD2AQ8NA29 543 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 KDM1BQ8NB78 822 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 SNIP1Q8TAD8 396 aaKnown RBP11.91□□□□□ -0.5
MRPS28-206ENST00000520946 KCTD13Q8WZ19 329 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 IRGQQ8WZA9 623 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 EEF2KMTQ96G04 330 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 SERPINB11Q96P15 392 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 TSG101Q99816 390 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 ORAI3Q9BRQ5 295 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 MIS12Q9H081 205 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 ABCG4Q9H172 646 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 ERVMER34-1Q9H9K5 563 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 EVA1BQ9NVM1 165 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 J3QKU1 62 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 M0QYV0 167 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 SDC3O75056 442 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 FBXO21O94952 628 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 RHOBTB3O94955 611 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.5
MRPS28-206ENST00000520946 MT-CO3P00414 261 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 PLA2G2AP14555 144 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 CMA1P23946 247 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 TBXAS1P24557 533 aaPredicted RBP11.9□□□□□ -0.5
MRPS28-206ENST00000520946 SLC6A4P31645 630 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 NUDT1P36639 197 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 ADPRHP54922 357 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 RPS24P62847 133 aaKnown RBP11.9□□□□□ -0.5
MRPS28-206ENST00000520946 DNM1Q05193 864 aaKnown RBP11.9□□□□□ -0.5
MRPS28-206ENST00000520946 KCNH2Q12809 1159 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 FAM46CQ5VWP2 391 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 MSANTD2Q6P1R3 559 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 LGI2Q8N0V4 545 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 GUF1Q8N442 669 aaKnown RBP11.9□□□□□ -0.5
MRPS28-206ENST00000520946 ZNF248Q8NDW4 579 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 RNF34Q969K3 372 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 AZIN2Q96A70 460 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 FAM149B1Q96BN6 582 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 KLHDC7BQ96G42 594 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 RPL10LQ96L21 214 aaKnown RBP11.9□□□□□ -0.5
MRPS28-206ENST00000520946 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 EBF2Q9HAK2 575 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 ST7Q9NRC1 585 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 SLC12A6Q9UHW9 1150 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 PCDHB4Q9Y5E5 795 aa11.9□□□□□ -0.5
MRPS28-206ENST00000520946 A0A1W2PR77 199 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 C7P10643 843 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 ALPPL2P10696 532 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 CTSOP43234 321 aaPredicted RBP11.89□□□□□ -0.51
MRPS28-206ENST00000520946 RXRGP48443 463 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 UCNP55089 124 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 PCBP4P57723 403 aaKnown RBP11.89□□□□□ -0.51
MRPS28-206ENST00000520946 TMPRSS3P57727 454 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 SULT2A1Q06520 285 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 CETN1Q12798 172 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 OVGP1Q12889 678 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 KCNJ12Q14500 433 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 ELAVL3Q14576 367 aaKnown RBP11.89□□□□□ -0.51
MRPS28-206ENST00000520946 SHBQ15464 509 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 STILQ15468 1287 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 EDRF1Q3B7T1 1238 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 TBC1D25Q3MII6 688 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 SETMARQ53H47 684 aaPredicted RBP11.89□□□□□ -0.51
MRPS28-206ENST00000520946 FAM133BQ5BKY9 247 aaKnown RBP11.89□□□□□ -0.51
MRPS28-206ENST00000520946 MS4A13Q5J8X5 152 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 TMEM270Q6UE05 265 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 MMS22LQ6ZRQ5 1243 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 BHLHA9Q7RTU4 235 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 CHSY1Q86X52 802 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 HSCBQ8IWL3 235 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 SPACA3Q8IXA5 215 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 LSMEM2Q8N112 164 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 SCML4Q8N228 414 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 ZNF843Q8N446 348 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 AADATQ8N5Z0 425 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 OR8D1Q8WZ84 308 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 TSC1Q92574 1164 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 SLCO3A1Q9UIG8 710 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 RCOR1Q9UKL0 485 aa11.89□□□□□ -0.51
MRPS28-206ENST00000520946 DMTF1Q9Y222 760 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms