RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 DHTKD1Q96HY7 919 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 SLC6A17Q9H1V8 727 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 LRRC4Q9HBW1 653 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 CAPN10Q9HC96 672 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 METTL14Q9HCE5 456 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 CD93Q9NPY3 652 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 ELOVL2Q9NXB9 296 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 STOML2Q9UJZ1 356 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 MAN1B1Q9UKM7 699 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 KIAA1257Q9ULG3 409 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 SLC6A14Q9UN76 642 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 CYP8B1Q9UNU6 501 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 WASF3Q9UPY6 502 aa9.68□□□□□ -0.86
CTNNA1-221ENST00000520339 ATXN2Q99700 1313 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 CHD8Q9HCK8 2581 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 YJEFN3A6XGL0 299 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 UPK3BL1B0FP48 263 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 UPK3BL2E5RIL1 263 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 E7ENQ6 273 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 TIMM44O43615 452 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 MAP3K6O95382 1288 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 CYBBP04839 570 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SERPINF2P08697 491 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 PAEPP09466 180 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SETSIPP0DME0 302 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 FMO5P49326 533 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 ZNF132P52740 706 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 CTBSQ01459 385 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 PLAURQ03405 335 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 ADIGQ0VDE8 80 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 HYAL2Q12891 473 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SEMA3BQ13214 749 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 CNGA2Q16280 664 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 FUT11Q495W5 492 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 TMEM215Q68D42 235 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 TTI2Q6NXR4 508 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 KIAA1324Q6UXG2 1013 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 ANKS1BQ7Z6G8 1248 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 PIP4P1Q86T03 277 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 FMNL3Q8IVF7 1028 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SCML4Q8N228 414 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 DEFB124Q8NES8 71 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 LMO3Q8TAP4 145 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SLC35F5Q8WV83 523 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 UCMAQ8WVF2 138 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 ZSWIM1Q9BR11 485 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SLC2A11Q9BYW1 496 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 FSCN3Q9NQT6 498 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 CNGB3Q9NQW8 809 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 ITM2CQ9NQX7 267 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 OLA1Q9NTK5 396 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 HESX1Q9UBX0 185 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SFMBT1Q9UHJ3 866 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 HOOK1Q9UJC3 728 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 HBS1LQ9Y450 684 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 SPAG17Q6Q759 2223 aa9.67□□□□□ -0.86
CTNNA1-221ENST00000520339 ZNF638Q14966 1978 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 CACNA1EQ15878 2313 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 PSMA7O14818 248 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 P4HA2O15460 535 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 CFIP05156 583 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 BMP6P22004 513 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 HOXD9P28356 352 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 CD6P30203 668 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 HARS2P49590 506 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 DAOAP59103 153 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 ZNF252P-AS1Q0IIN9 211 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 ZNF234Q14588 700 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 STARD3Q14849 445 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 EIF4HQ15056 248 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 E2F5Q15329 346 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 NFKBIBQ15653 356 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 MPPE1Q53F39 396 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 MEI1Q5TIA1 1274 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 ISM2Q6H9L7 571 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 PMF1Q6P1K2 205 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 FOXR2Q6PJQ5 311 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 TMEM270Q6UE05 265 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 RABEPKQ7Z6M1 372 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 TMPRSS6Q8IU80 811 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 SIX6OS1Q8N1H7 587 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 DDI1Q8WTU0 396 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 RNF139Q8WU17 664 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 SORCS1Q8WY21 1168 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 KAT5Q92993 513 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 HSPA12BQ96MM6 686 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 NSUN5Q96P11 429 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 NT5C1BQ96P26 610 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 GBP4Q96PP9 640 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 MKRN2Q9H000 416 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 PRDM16Q9HAZ2 1276 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 WSB2Q9NYS7 404 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 USP36Q9P275 1121 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 PCDHB4Q9Y5E5 795 aa9.66□□□□□ -0.86
CTNNA1-221ENST00000520339 SYNCRIPO60506 623 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-221ENST00000520339 TSPAN3O60637 253 aa9.65□□□□□ -0.86
CTNNA1-221ENST00000520339 LATS1O95835 1130 aa9.65□□□□□ -0.86
CTNNA1-221ENST00000520339 TOP3BO95985 862 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-221ENST00000520339 CALCAP01258 141 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms