RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 NUMA1Q14980 2115 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 CABIN1Q9Y6J0 2220 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 SRRM3A6NNA2 597 aaPredicted RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 E5RJQ4 531 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 PAPSS1O43252 624 aaPredicted RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 CBFA2T3O75081 653 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 RNASEH2AO75792 299 aaKnown RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 GLI1P08151 1106 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 TACR2P21452 398 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 GRK6P43250 576 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 RACK1P63244 317 aaKnown RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 BNC1Q01954 994 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 SULT2A1Q06520 285 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 ARID5BQ14865 1188 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 TPD52L1Q16890 204 aaPredicted RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 ARHGAP44Q17R89 818 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 EFHC1Q5JVL4 640 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 RABGAP1LQ5R372 815 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 TTC39BQ5VTQ0 682 aaPredicted RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 SYPL2Q5VXT5 272 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 TMEM110Q86TL2 294 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 MMAAQ8IVH4 418 aaKnown RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 PNPLA1Q8N8W4 532 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 LMLNQ96KR4 655 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 CRACR2AQ9BSW2 395 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 ACE2Q9BYF1 805 aaPredicted RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 MTG2Q9H4K7 406 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 FAM204AQ9H8W3 233 aa11.24□□□□□ -0.61
PVT1-208ENST00000519481 INTS6Q9UL03 887 aaKnown RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
PVT1-208ENST00000519481 A0A1W2PP55 124 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 KCNU1A8MYU2 1149 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 MID1O15344 667 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 ADH1BP00325 375 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 C5AR1P21730 350 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 CCR1P32246 355 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 SLC8A1P32418 973 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 GALCP54803 685 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 PTK2Q05397 1052 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 PDCLQ13371 301 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 EXOC3L4Q17RC7 722 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 FSCBQ5H9T9 825 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 C9orf64Q5T6V5 341 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 SMYD5Q6GMV2 418 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 NCEH1Q6PIU2 408 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 DBX2Q6ZNG2 339 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 MMS22LQ6ZRQ5 1243 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 SND1Q7KZF4 910 aaKnown RBP eCLIP11.23□□□□□ -0.61
PVT1-208ENST00000519481 DSG4Q86SJ6 1040 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 OR2T34Q8NGX1 318 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 MYO19Q96H55 970 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 MRGPRX3Q96LB0 322 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 SYNCQ9H7C4 482 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 ASNSD1Q9NWL6 643 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 DDIT4Q9NX09 232 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 APEX2Q9UBZ4 518 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 RWDD2AQ9UIY3 292 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 FZD4Q9ULV1 537 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 ITIH6Q6UXX5 1313 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 CFAP47Q6ZTR5 3102 aa11.23□□□□□ -0.61
PVT1-208ENST00000519481 SYNJ2BP-COX16A0A087WUM0 186 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 A0A1B0GVM2 712 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 A0A1W2PPC4 97 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 TCAF2A6NFQ2 919 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 GOLGA8CPA6NN73 597 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 TTC34A8MYJ7 566 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 VILLO15195 856 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 TNFSF14O43557 240 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 PCDHGA12O60330 932 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 HSF2BPO75031 334 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 GADD45BO75293 160 aaPredicted RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 IL1BP01584 269 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 GOT1P17174 413 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 KRT9P35527 623 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 CTSOP43234 321 aaPredicted RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 CTSKP43235 329 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 MTIF2P46199 727 aaKnown RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 PSMD8P48556 350 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 SCAPQ12770 1279 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 AKAP13Q12802 2813 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 SLC45A4Q5BKX6 768 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 OR6B2Q6IFH4 312 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 CCNI2Q6ZMN8 369 aaPredicted RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 SLCO6A1Q86UG4 719 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 DEFB106AQ8N104 65 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 CCAR2Q8N163 923 aaKnown RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 STK40Q8N2I9 435 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 GALNT15Q8N3T1 639 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 OR14C36Q8NHC7 312 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 MYEOVQ96EZ4 313 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 PPP1R13BQ96KQ4 1090 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 RPL10LQ96L21 214 aaKnown RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 RPRD1AQ96P16 312 aaPredicted RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 NEUROG2Q9H2A3 272 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 CCDC86Q9H6F5 360 aaKnown RBP11.22□□□□□ -0.61
PVT1-208ENST00000519481 AASDHPPTQ9NRN7 309 aa11.22□□□□□ -0.61
PVT1-208ENST00000519481 COX16Q9P0S2 106 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms