RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 TRIM5Q9C035 493 aa6.34□□□□□ -1.39
SQLE-203ENST00000518931 OR10A4Q9H209 315 aa6.34□□□□□ -1.39
SQLE-203ENST00000518931 CCDC177Q9NQR7 707 aaPredicted RBP6.34□□□□□ -1.39
SQLE-203ENST00000518931 PAPOLBQ9NRJ5 636 aaKnown RBP6.34□□□□□ -1.39
SQLE-203ENST00000518931 SNX8Q9Y5X2 465 aa6.34□□□□□ -1.39
SQLE-203ENST00000518931 TDRD9Q8NDG6 1382 aaKnown RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 SLC7A4O43246 635 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 PIAS2O75928 621 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 VNN1O95497 513 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 ADRB2P07550 413 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 CLTBP09497 229 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 EBLN1P0CF75 366 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 HLA-DPA1P20036 260 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 HOXD10P28358 340 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 CYP2C18P33260 490 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 CCT8P50990 548 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 POLR2FP61218 127 aaKnown RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 BFSP1Q12934 665 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 EFR3AQ14156 821 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 PPA1Q15181 289 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 ZNF750Q32MQ0 723 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 ADCK5Q3MIX3 580 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 FAM153CQ494X1 144 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 CERCAMQ5T4B2 595 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 RRAGBQ5VZM2 374 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 SLC9A4Q6AI14 798 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 PLAG1Q6DJT9 500 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 RAB12Q6IQ22 244 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 PPP1R42Q7Z4L9 355 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 CAND1Q86VP6 1230 aaKnown RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 RASAL3Q86YV0 1011 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 CCDC170Q8IYT3 715 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 ZNF540Q8NDQ6 660 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 ZNF75CPQ92670 426 aaPredicted RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 USP6NLQ92738 828 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 IQCDQ96DY2 449 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 ZBTB45Q96K62 511 aaPredicted RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 NEK1Q96PY6 1258 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 MAP7D2Q96T17 732 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 COLEC11Q9BWP8 271 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 KLK15Q9H2R5 256 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 CPNE5Q9HCH3 593 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 ZNHIT6Q9NWK9 470 aaKnown RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 ASB6Q9NWX5 421 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 AIPL1Q9NZN9 384 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 DKK4Q9UBT3 224 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 RGS17Q9UGC6 210 aaPredicted RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 CCNL1Q9UK58 526 aaPredicted RBP6.33□□□□□ -1.4
SQLE-203ENST00000518931 CFAP45Q9UL16 551 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 SH2B3Q9UQQ2 575 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 TRIM17Q9Y577 477 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 ENTPD2Q9Y5L3 495 aa6.33□□□□□ -1.4
SQLE-203ENST00000518931 AKR1B15C9JRZ8 316 aaPredicted RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 H0YC42 278 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 SYT5O00445 386 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 PSMA7O14818 248 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 THAP12O43422 761 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 SLC22A3O75751 556 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 PORP16435 677 aaPredicted RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 MAPK3P27361 379 aaPredicted RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 STIP1P31948 543 aaKnown RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 PSMC4P43686 418 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 HSPA7P48741 367 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 CASP6P55212 293 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 INHBEP58166 350 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 RBP5P82980 135 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 PPARDQ03181 441 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 GALNT1Q10472 559 aaPredicted RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 SMAD1Q15797 465 aaKnown RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 MPEG1Q2M385 716 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 WSCD2Q2TBF2 565 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 NAA16Q6N069 864 aaPredicted RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 IL27RAQ6UWB1 636 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 B4GALNT4Q76KP1 1039 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 HERVK_113Q902F9 699 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 CDCA5Q96FF9 252 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 C16orf45Q96MC5 204 aaPredicted RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 HGH1Q9BTY7 390 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 DPCDQ9BVM2 203 aaPredicted RBP6.32□□□□□ -1.4
SQLE-203ENST00000518931 DLL3Q9NYJ7 618 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 KIF17Q9P2E2 1029 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 LAMP5Q9UJQ1 280 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 RPS6KA6Q9UK32 745 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 TMEM5Q9Y2B1 443 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 PCDHGB5Q9Y5G0 923 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 UNC13AQ9UPW8 1703 aa6.32□□□□□ -1.4
SQLE-203ENST00000518931 AQP7P3A6NL99 342 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 GCOM1H8Y6P7 765 aaPredicted RBP6.31□□□□□ -1.4
SQLE-203ENST00000518931 DDX39AO00148 427 aaKnown RBP6.31□□□□□ -1.4
SQLE-203ENST00000518931 ACKR2O00590 384 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 CAPN9O14815 690 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 CD3EAPO15446 510 aaKnown RBP6.31□□□□□ -1.4
SQLE-203ENST00000518931 ZBTB43O43298 467 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 TSC22D2O75157 780 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 TSPAN9O75954 239 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 SNX4O95219 450 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 A1BGP04217 495 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 QDPRP09417 244 aa6.31□□□□□ -1.4
SQLE-203ENST00000518931 ENGP17813 658 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms