RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ATRIPQ8WXE1 791 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 SORCS1Q8WY21 1168 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 POLMQ9NP87 494 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-217ENST00000518538 CACNA2D2Q9NY47 1150 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 OR12D3Q9UGF7 316 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 INTS6Q9UL03 887 aaKnown RBP22.66■■□□□ 1.22
VEGFA-217ENST00000518538 STON1Q9Y6Q2 735 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 R4GN57 208 aa22.66■■□□□ 1.22
VEGFA-217ENST00000518538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-217ENST00000518538 LILRB5O75023 590 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 SRGAP2O75044 1071 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 MOCS3O95396 460 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 ATP5BP06576 529 aaKnown RBP22.65■■□□□ 1.22
VEGFA-217ENST00000518538 WASP42768 502 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 ZNF177Q13360 481 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-217ENST00000518538 ALFQ53S48 1182 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 PITRM1Q5JRX3 1037 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 WDR5BQ86VZ2 330 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 TTC17Q96AE7 1141 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 NUP85Q9BW27 656 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 PPARGC1AQ9UBK2 798 aaKnown RBP22.65■■□□□ 1.22
VEGFA-217ENST00000518538 EBF1Q9UH73 591 aa22.65■■□□□ 1.22
VEGFA-217ENST00000518538 RNF8O76064 485 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 CNTN5O94779 1100 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 ALDH1A2O94788 518 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 ASLP04424 464 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 DLDP09622 509 aaKnown RBP22.64■■□□□ 1.21
VEGFA-217ENST00000518538 CSKP41240 450 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 IL12RB1P42701 662 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 ACAP1Q15027 740 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 PLEKHG6Q3KR16 790 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 EFHC2Q5JST6 749 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 MANEALQ5VSG8 457 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 CYB5D2Q8WUJ1 264 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 ARHGEF26Q96DR7 871 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 NCAPGQ9BPX3 1015 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 ZYG11BQ9C0D3 744 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 MPP6Q9NZW5 540 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 FZD10Q9ULW2 581 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 PLA2G4CQ9UP65 541 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 TBC1D30Q9Y2I9 924 aa22.64■■□□□ 1.21
VEGFA-217ENST00000518538 CACNA1HO95180 2353 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 A0A1W2PQF6 199 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 H2AFZP0C0S5 128 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 CDC25BP30305 580 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 PXNP49023 591 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-217ENST00000518538 PLK1P53350 603 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 PTPRNQ16849 979 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 H2AFVQ71UI9 128 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 RASSF3Q86WH2 238 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 APCDD1Q8J025 514 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 ARFGAP1Q8N6T3 406 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 CTNNBL1Q8WYA6 563 aaPredicted RBP22.63■■□□□ 1.21
VEGFA-217ENST00000518538 PPP1R9BQ96SB3 815 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 PACSIN1Q9BY11 444 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 SEMA4AQ9H3S1 761 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 CD248Q9HCU0 757 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 SPTLC3Q9NUV7 552 aa22.63■■□□□ 1.21
VEGFA-217ENST00000518538 TCRBV21S2A2A0A5A6 115 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 WASH3PC4AMC7 463 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 PROB1E7EW31 1015 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 FAM72CH0Y354 149 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 AXIN1O15169 862 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 MZF1P28698 734 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-217ENST00000518538 L1CAMP32004 1257 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 CNR2P34972 360 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 PIGHQ14442 188 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-217ENST00000518538 FNDC3BQ53EP0 1204 aaKnown RBP22.62■■□□□ 1.21
VEGFA-217ENST00000518538 FAM72AQ5TYM5 149 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 ANO7Q6IWH7 933 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 FAM72DQ6L9T8 149 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 SERPINA13PQ6UXR4 307 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 TFAP2DQ7Z6R9 452 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 SETD3Q86TU7 594 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-217ENST00000518538 FAM72BQ86X60 149 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 OR52K2Q8NGK3 314 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 PANX2Q96RD6 677 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 PHOX2BQ99453 314 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 MAGEB5Q9BZ81 275 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 RETREG1Q9H6L5 497 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 IP6K2Q9UHH9 426 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 ANAPC7Q9UJX3 599 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 RAD54BQ9Y620 910 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 FANCMQ8IYD8 2048 aa22.62■■□□□ 1.21
VEGFA-217ENST00000518538 MUC22E2RYF6 1773 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-217ENST00000518538 LRIG2O94898 1065 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 RHOCP08134 193 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 TMEM253P0C7T8 217 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 PRKCHP24723 683 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 PLA2G5P39877 138 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 STARD3Q14849 445 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 C6orf118Q5T5N4 469 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 KIAA1211LQ6NV74 962 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 NIPA2Q8N8Q9 360 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 MDGA1Q8NFP4 955 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 ZNF564Q8TBZ8 553 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-217ENST00000518538 TBC1D31Q96DN5 1066 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 FAM122AQ96E09 287 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 ALG14Q96F25 216 aa22.61■■□□□ 1.21
VEGFA-217ENST00000518538 TMEM245Q9H330 911 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms