RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 ZNF143P52747 638 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-206ENST00000518074 ACTN3Q08043 901 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-206ENST00000518074 CA9Q16790 459 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 ANKRD20A8PQ5CZ79 823 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 TRIM67Q6ZTA4 783 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 POLNQ7Z5Q5 900 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
SPIDR-206ENST00000518074 FBXO36Q8NEA4 188 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 MCRS1Q96EZ8 462 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-206ENST00000518074 NSRP1Q9H0G5 558 aaKnown RBP11.3□□□□□ -0.6
SPIDR-206ENST00000518074 MTRRQ9UBK8 725 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 ITGA11Q9UKX5 1188 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 HCN4Q9Y3Q4 1203 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 CITO14578 2027 aa11.3□□□□□ -0.6
SPIDR-206ENST00000518074 CCT8L1PA6NM43 557 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 SRRM3A6NNA2 597 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-206ENST00000518074 F8W810 466 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 TMEM63AO94886 807 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 ENPP1P22413 925 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 CA4P22748 312 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 LMO2P25791 158 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 SCTRP47872 440 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 SIGLEC14Q08ET2 396 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 RAB33AQ14088 237 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 CRYMQ14894 314 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 SMAD1Q15797 465 aaKnown RBP11.29□□□□□ -0.6
SPIDR-206ENST00000518074 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-206ENST00000518074 FAM171A1Q5VUB5 890 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 FAAH2Q6GMR7 532 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 ANKS3Q6ZW76 656 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 CNPY3Q9BT09 278 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 FBXW11Q9UKB1 542 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 DERAQ9Y315 318 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 NME7Q9Y5B8 376 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 KCNN4O15554 427 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 GCAP28676 217 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 ARL4CP56559 192 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 GPX6P59796 221 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 ROR1Q01973 937 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 DNAJC3Q13217 504 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 PSMD5Q16401 504 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 CCDC14Q49A88 953 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 RTP2Q5QGT7 225 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 DRICH1Q6PGQ1 229 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-206ENST00000518074 CCDC80Q76M96 950 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 PPIL6Q8IXY8 311 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 C12orf76Q8N812 135 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-206ENST00000518074 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 NXPE3Q969Y0 559 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 NACC2Q96BF6 587 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 CLSTN3Q9BQT9 956 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 PAAF1Q9BRP4 392 aa11.29□□□□□ -0.6
SPIDR-206ENST00000518074 WDR6Q9NNW5 1121 aaKnown RBP11.29□□□□□ -0.6
SPIDR-206ENST00000518074 ZFP37Q9Y6Q3 630 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-206ENST00000518074 C2CD4BA6NLJ0 364 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 C2CD2LO14523 706 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 ALOX15BO15296 676 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 TGM5O43548 720 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 XPOTO43592 962 aaKnown RBP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 LRPAP1P30533 357 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 SDC4P31431 198 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 HNRNPH1P31943 449 aaKnown RBP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 FOXN2P32314 431 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 NUBP1P53384 320 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 YWHAGP61981 247 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 ZBTB6Q15916 424 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 LCLAT1Q6UWP7 414 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 ARHGEF18Q6ZSZ5 1173 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 CCT6BQ92526 530 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 FAF2Q96CS3 445 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 CFAP36Q96G28 342 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 SMC6Q96SB8 1091 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 RAB6BQ9NRW1 208 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 C2CD2Q9Y426 696 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 TRIP11Q15643 1979 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 FAM47DPA6NHR8 397 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 C2CD4DB7Z1M9 353 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 H7C4K7 107 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 M0R296 226 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 E2F6O75461 281 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 CLCNKBP51801 687 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 CCDC149Q6ZUS6 474 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 YTHDF3Q7Z739 585 aaKnown RBP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 PIGWQ7Z7B1 504 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 IGDCC3Q8IVU1 814 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 PDIK1LQ8N165 341 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 FNIP1Q8TF40 1166 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 MAML1Q92585 1016 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 APOL5Q9BWW9 433 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 SLC7A5P2Q9GIP4 190 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms