RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 DBF4BQ8NFT6 615 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CMASQ8NFW8 434 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 OR14A16Q8NHC5 309 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 LILRB1Q8NHL6 650 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CTCFLQ8NI51 663 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 GABPB2Q8TAK5 448 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 GLMPQ8WWB7 406 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 LRTOMTQ8WZ04 291 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 NPIPB3Q92617 1050 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 RTP4Q96DX8 246 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 MCRS1Q96EZ8 462 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 LRRC46Q96FV0 321 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 HES6Q96HZ4 224 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 IGSF21Q96ID5 467 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CLMNQ96JQ2 1002 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ADGRG7Q96K78 797 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 SNX22Q96L94 193 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 FAM227BQ96M60 508 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 AIFM3Q96NN9 605 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 FIZ1Q96SL8 496 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 EIF3CQ99613 913 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 APOL5Q9BWW9 433 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 FRMD8Q9BZ67 464 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ZCWPW1Q9H0M4 648 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 OSBPL5Q9H0X9 879 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 IL25Q9H293 177 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 TMEM60Q9H2L4 133 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CATSPERBQ9H7T0 1116 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 DDX31Q9H8H2 851 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 PRDM16Q9HAZ2 1276 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ZNF304Q9HCX3 659 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ERVK-5Q9HDB9 667 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 PNRC2Q9NPJ4 139 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 HEYLQ9NQ87 328 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 HOMER2Q9NSB8 354 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 DDX56Q9NY93 547 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 MALT1Q9UDY8 824 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 DDX20Q9UHI6 824 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 PNMA8BQ9ULN7 279 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 TPCN1Q9ULQ1 816 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 NOB1Q9ULX3 412 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CAPN11Q9UMQ6 739 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 L1RE1Q9UN81 338 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CORO2BQ9UQ03 480 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 PCDHGB6Q9Y5F9 930 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 MMP24Q9Y5R2 645 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 FNDC1Q4ZHG4 1894 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 SPATA31A5Q5VU36 1347 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 SPATA31A7Q8IWB4 1347 aa0.6□□□□□ -2.31
SCARNA16.5-201ENST00000517114 SAA2-SAA4A0A096LPE2 208 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 IGLV5-52A0A0A0MRZ9 124 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 A0A1B0GU03 582 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 GAGE12JA6NER3 117 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 MS4A18H0YCH9 400 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 STMND1H3BQB6 276 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 BMPR1BO00238 502 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 KCNQ3O43525 872 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 LDB2O43679 373 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 MGEA5O60502 916 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CCNT2O60583 730 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 KCNJ13O60928 360 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ALDH1L1O75891 902 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 KRT36O76013 467 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 SGPL1O95470 568 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 GLUD1P00367 558 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 APOHP02749 345 aaPredicted RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ANXA2P07355 339 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ALDOCP09972 364 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ZNF883P0CG24 379 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 MYF5P13349 255 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 GM2AP17900 193 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 MMP8P22894 467 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 PEX2P28328 305 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 C21orf33P30042 268 aaPredicted RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 KRT2P35908 639 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 PPP3CCP48454 512 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 GLUD2P49448 558 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 RASSF2P50749 326 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 RAB27AP51159 221 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 NUDT6P53370 316 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ATP12AP54707 1039 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 FAM3BP58499 235 aaPredicted RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 SEC61A1P61619 476 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 TUBA1BP68363 451 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ZBTB16Q05516 673 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 DSC1Q08554 894 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ARL16Q0P5N6 197 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ST3GAL1Q11201 340 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 ILF3Q12906 894 aaKnown RBP eCLIP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 SNTA1Q13424 505 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 CBFBQ13951 182 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 POLD3Q15054 466 aaPredicted RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 FCN2Q15485 313 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 DUSP6Q16828 381 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 KIAA0753Q2KHM9 967 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 KIF19Q2TAC6 998 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 TDRD12Q587J7 1177 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 C10orf76Q5T2E6 689 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 LCE3EQ5T5B0 92 aa0.59□□□□□ -2.31
SCARNA16.5-201ENST00000517114 LCE3AQ5TA76 89 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms