RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TNFRSF4P43489 277 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RECQLP46063 649 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SOX9P48436 509 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GALK1P51570 392 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SEC13P55735 322 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 YBEYP58557 167 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TAS2R40P59535 323 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DYNLT1P63172 113 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SLC25A11Q02978 314 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GNA12Q03113 381 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZNF252P-AS1Q0IIN9 211 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 EIF4EBP2Q13542 120 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 STARD3Q14849 445 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 EIF4HQ15056 248 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PON2Q15165 354 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DPYSL2Q16555 572 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ACCSLQ4AC99 568 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FBXO43Q4G163 708 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FNDC3BQ53EP0 1204 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RAB6CQ53S08 254 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FAM133BQ5BKY9 247 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ANKRD20A8PQ5CZ79 823 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TFDP3Q5H9I0 405 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 OTUD1Q5VV17 481 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DAB2IPQ5VWQ8 1189 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FYB2Q5VWT5 728 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RETSATQ6NUM9 610 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZNF783Q6ZMS7 281 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TRIM67Q6ZTA4 783 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 BNIPLQ7Z465 357 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 C14orf80Q86SX3 495 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 METTL3Q86U44 580 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NT5DC3Q86UY8 548 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CIR1Q86X95 450 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FAM217AQ8IXS0 508 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KATNAL2Q8IYT4 538 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PYROXD2Q8N2H3 581 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RTL3Q8N8U3 475 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CCNYQ8ND76 341 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 EXD1Q8NHP7 514 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FIBINQ8TAL6 211 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 MAIP1Q8WWC4 291 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 IGSF8Q969P0 613 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 HAUS1Q96CS2 278 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ASIC4Q96FT7 647 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CCDC114Q96M63 670 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PEBP4Q96S96 227 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NAP1L3Q99457 506 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PRMT1Q99873 361 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZNF670Q9BS34 389 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RAB6CQ9H0N0 254 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 MAGEH1Q9H213 219 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PCDH18Q9HCL0 1135 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ATP13A1Q9HD20 1204 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TMPRSS4Q9NRS4 437 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TMEM248Q9NWD8 314 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CALCOCO1Q9P1Z2 691 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 XPO7Q9UIA9 1087 aaKnown RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GGA2Q9UJY4 613 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PYCARDQ9ULZ3 195 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SIT1Q9Y3P8 196 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PCDHA3Q9Y5H8 950 aa5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NUP210Q8TEM1 1887 aaPredicted RBP5.6□□□□□ -1.51
SCARNA16.4-201ENST00000516956 IGLV3-10A0A075B6K4 115 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 KANSL1LA0AUZ9 987 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TMEM221A6NGB7 291 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ZSCAN5CA6NGD5 496 aaPredicted RBP5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RASA4BC9J798 803 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 FAM72CH0Y354 149 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 H7C0C1 242 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 M0R296 226 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CBX4O00257 560 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PPP1R12AO14974 1030 aaPredicted RBP5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NPC1O15118 1278 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RASA4O43374 803 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CEP104O60308 925 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 GREM1O60565 184 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RNASEH1O60930 286 aaKnown RBP5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CNTN5O94779 1100 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ALDH1A2O94788 518 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 AMPD1P23109 780 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 IL1R2P27930 398 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 HOXD9P28356 352 aaPredicted RBP5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CTNNA1P35221 906 aaKnown RBP5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CSKP41240 450 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PAFAH1B1P43034 410 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 MAGEA9P43362 315 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 TNNT3P45378 269 aaPredicted RBP5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ATP5OP48047 213 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SLC6A11P48066 632 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 NDST2P52849 883 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ECT2LQ008S8 904 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 RAD51Q06609 339 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SLC20A2Q08357 652 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 SFSWAPQ12872 951 aaKnown RBP5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 DPYSL3Q14195 570 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 CA9Q16790 459 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 PARP15Q460N3 678 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ATP13A4Q4VNC1 1196 aa5.59□□□□□ -1.51
SCARNA16.4-201ENST00000516956 ALFQ53S48 1182 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms