RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 SMTNL1A8MU46 457 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 J3KTA2 159 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 NTN3O00634 580 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 LINC01565O15544 149 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 TSPAN6O43657 245 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 VIPP01282 170 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 KLKB1P03952 638 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 ITGA5P08648 1049 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 ALDOCP09972 364 aaKnown RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 SRGAP2BP0DMP2 458 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 PKMP14618 531 aaKnown RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 ARSBP15848 533 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 RPL17P18621 184 aaKnown RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 ART1P52961 327 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 SELENOVP59797 346 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 EEF1A2Q05639 463 aaKnown RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 COASYQ13057 564 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 ARL13AQ5H913 290 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 C9orf57Q5W0N0 161 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 Q6ZSV7 163 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 MDGA2Q7Z553 956 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 MYO1HQ8N1T3 1032 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 CCDC33Q8N5R6 958 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 GLIS1Q8NBF1 620 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 GABPB2Q8TAK5 448 aaPredicted RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 ADAD1Q96M93 576 aaKnown RBP2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 NUP62CLQ9H1M0 184 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 TXNRD2Q9NNW7 524 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 FBXO28Q9NVF7 368 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 OBP2AQ9NY56 170 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 MYO1AQ9UBC5 1043 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 MAN2B2Q9Y2E5 1009 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 WDR81Q562E7 1941 aa2.6□□□□□ -1.99
SNORA40.14-201ENST00000516543 GXYLT2A0PJZ3 443 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 SRRM3A6NNA2 597 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 PQBP1O60828 265 aaKnown RBP2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 MYL4P12829 197 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 ZNF12P17014 697 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 EGR1P18146 543 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 RASSF2P50749 326 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 KIF5AQ12840 1032 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 GALNT3Q14435 633 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 DCAF12L2Q5VW00 463 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 ZNF367Q7RTV3 350 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 SKAP1Q86WV1 359 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 KDM1BQ8NB78 822 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 CCDC150Q8NCX0 1101 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 PMM1Q92871 262 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 SNX27Q96L92 541 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 NUDT22Q9BRQ3 303 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 CDT1Q9H211 546 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 EPS8L2Q9H6S3 715 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 KCNK9Q9NPC2 374 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 FZD10Q9ULW2 581 aa2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 MAGED2Q9UNF1 606 aaPredicted RBP2.59□□□□□ -1.99
SNORA40.14-201ENST00000516543 KIF26BQ2KJY2 2108 aa2.59□□□□□ -2
SNORA40.14-201ENST00000516543 LOC105369274A0A096LPK9 316 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 LOC102723532A0A0G2JNH3 316 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 A0A1W2PPC4 97 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 FAM234BA2RU67 622 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 GAGE12JA6NER3 117 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 BTBD18B2RXH4 712 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 MSI1O43347 362 aaKnown RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 LDB3O75112 727 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 CER1O95813 267 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 TCEA1P23193 301 aaKnown RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 HOXD3P31249 432 aaPredicted RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 TNFSF8P32971 234 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 CASP5P51878 434 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 TMPRSS3P57727 454 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 FAM3BP58499 235 aaPredicted RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 HILS1P60008 231 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 ZBTB16Q05516 673 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 GRSF1Q12849 480 aaKnown RBP eCLIP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 TRAF3Q13114 568 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 CBFBQ13951 182 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 HNF4GQ14541 408 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 GRM4Q14833 912 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 AAK1Q2M2I8 961 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 LCE1FQ5T754 118 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 ATG9BQ674R7 924 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 ANKRD40Q6AI12 368 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 FBXL22Q6P050 247 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 USP17L6PQ6QN14 398 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 FAM217AQ8IXS0 508 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 OR4N4Q8N0Y3 316 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 NEXN-AS1Q8NBZ9 246 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 SRFBP1Q8NEF9 429 aaKnown RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 TTC8Q8TAM2 541 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 JDP2Q8WYK2 163 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 APOLD1Q96LR9 279 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 PAAF1Q9BRP4 392 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 FRMD8Q9BZ67 464 aaPredicted RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 PNRC2Q9NPJ4 139 aaKnown RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 RGL1Q9NZL6 768 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 DTX4Q9Y2E6 619 aa2.58□□□□□ -2
SNORA40.14-201ENST00000516543 UBE2J1Q9Y385 318 aaPredicted RBP2.58□□□□□ -2
SNORA40.14-201ENST00000516543 NOTCH3Q9UM47 2321 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms