RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PCDHGB2Q9Y5G2 931 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 INSL5Q9Y5Q6 135 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 CUX2O14529 1486 aa4.4□□□□□ -1.71
LINC01088-211ENST00000515597 DPPA5A6NC42 116 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 M0QYT0 321 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 CER1O95813 267 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 MYL1P05976 194 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 ALDH18A1P54886 795 aaKnown RBP4.39□□□□□ -1.71
LINC01088-211ENST00000515597 TBX4P57082 545 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 DGKKQ5KSL6 1271 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 CCSAPQ6IQ19 270 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-211ENST00000515597 DEPTORQ8TB45 409 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 IPO4Q8TEX9 1081 aaKnown RBP4.39□□□□□ -1.71
LINC01088-211ENST00000515597 NUDCD2Q8WVJ2 157 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 WDR60Q8WVS4 1066 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 LPAR1Q92633 364 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 MYD88Q99836 296 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 NTPCRQ9BSD7 190 aaKnown RBP4.39□□□□□ -1.71
LINC01088-211ENST00000515597 SFXN1Q9H9B4 322 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 IGSF9Q9P2J2 1179 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 SLC39A10Q9ULF5 831 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 LAMP3Q9UQV4 416 aa4.39□□□□□ -1.71
LINC01088-211ENST00000515597 LMTK3Q96Q04 1460 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 CYP3A7-CYP3A51PA0A087WV96 503 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 RPP40O75818 363 aaKnown RBP4.38□□□□□ -1.71
LINC01088-211ENST00000515597 ALDOAP04075 364 aaKnown RBP4.38□□□□□ -1.71
LINC01088-211ENST00000515597 CYP3A7P24462 503 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 NEK3P51956 506 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 FOXL2P58012 376 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 TAS2R50P59544 299 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 SHC2P98077 582 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 PICALMQ13492 652 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 IL31Q6EBC2 164 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 TMEM88Q6PEY1 159 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-211ENST00000515597 NR2C2APQ86WQ0 139 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 NRSN1Q8IZ57 195 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 IQCF1Q8N6M8 205 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 SF3B5Q9BWJ5 86 aaKnown RBP4.38□□□□□ -1.71
LINC01088-211ENST00000515597 TP63Q9H3D4 680 aaPredicted RBP4.38□□□□□ -1.71
LINC01088-211ENST00000515597 IL21RQ9HBE5 538 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 TXNRD2Q9NNW7 524 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 SPAG4Q9NPE6 437 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 SLC8A2Q9UPR5 921 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 ZBTB1Q9Y2K1 713 aa4.38□□□□□ -1.71
LINC01088-211ENST00000515597 RHODO00212 210 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 PIP5K1BO14986 540 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 PLIN1O60240 522 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 IFNA2P01563 188 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 CYP3A4P08684 503 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 FGF3P11487 239 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-211ENST00000515597 ABCB4P21439 1286 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 KLRK1P26718 216 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 RGS19P49795 217 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 RPL15P61313 204 aaKnown RBP4.37□□□□□ -1.71
LINC01088-211ENST00000515597 BTKQ06187 659 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 LTBQ06643 244 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 TTC39AQ5SRH9 613 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 ANKRD40Q6AI12 368 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 RINT1Q6NUQ1 792 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 CENPIQ92674 756 aaPredicted RBP4.37□□□□□ -1.71
LINC01088-211ENST00000515597 REXO5Q96IC2 774 aaKnown RBP4.37□□□□□ -1.71
LINC01088-211ENST00000515597 TNIP3Q96KP6 325 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 TASP1Q9H6P5 420 aa4.37□□□□□ -1.71
LINC01088-211ENST00000515597 SCN5AQ14524 2016 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 FOXO6A8MYZ6 492 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 MDM4O15151 490 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 ACAA1P09110 424 aaPredicted RBP4.36□□□□□ -1.71
LINC01088-211ENST00000515597 ALDOCP09972 364 aaKnown RBP4.36□□□□□ -1.71
LINC01088-211ENST00000515597 CIITAP33076 1130 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 MLH1P40692 756 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 NFATC4Q14934 902 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 TRIM60Q495X7 471 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 TRILQ7L0X0 811 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 CYB5R4Q7L1T6 521 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 SRLQ86TD4 932 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 SYTL1Q8IYJ3 562 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 TMEM174Q8WUU8 243 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 RSC1A1Q92681 617 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 KAT2AQ92830 837 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 INPP5DQ92835 1189 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 MUL1Q969V5 352 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 TMEM41AQ96HV5 264 aa4.36□□□□□ -1.71
LINC01088-211ENST00000515597 PRPF18Q99633 342 aaKnown RBP4.36□□□□□ -1.71
LINC01088-211ENST00000515597 RPS10-NUDT3A0A1W2PQS6 291 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 KCNJ18B7U540 433 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 PAPSS2O95340 614 aaPredicted RBP4.35□□□□□ -1.71
LINC01088-211ENST00000515597 NFATC1O95644 943 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 GRK5P34947 590 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 ENTPD1P49961 510 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 FAM3BP58499 235 aaPredicted RBP4.35□□□□□ -1.71
LINC01088-211ENST00000515597 RBM6P78332 1123 aaKnown RBP4.35□□□□□ -1.71
LINC01088-211ENST00000515597 KEAP1Q14145 624 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 HMBOX1Q6NT76 420 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 PDXDC1Q6P996 788 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 NOL8Q76FK4 1167 aaKnown RBP4.35□□□□□ -1.71
LINC01088-211ENST00000515597 RTL10Q7L3V2 364 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 MDGA2Q7Z553 956 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 GATAD2AQ86YP4 633 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 OSBPL5Q9H0X9 879 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms