RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GJC1P36383 396 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 EIF2DP41214 584 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 OXCT1P55809 520 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 AMPD2Q01433 879 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 GAD2Q05329 585 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 NR1H3Q13133 447 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 RUNX3Q13761 415 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 TFDP2Q14188 446 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 PAFAH1B3Q15102 231 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 LY6G5CQ5SRR4 150 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 SYT10Q6XYQ8 523 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 ZNF783Q6ZMS7 281 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 BBS12Q6ZW61 710 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 SETD3Q86TU7 594 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 TMEM25Q86YD3 366 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 UMODL1-AS1Q8N2C9 162 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 CPA6Q8N4T0 437 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 PCDH19Q8TAB3 1148 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 MYEOVQ96EZ4 313 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 CALN1Q9BXU9 219 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 OSBPL8Q9BZF1 889 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 ECT2Q9H8V3 914 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 DNAI1Q9UI46 699 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 SNX10Q9Y5X0 201 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 RAD54BQ9Y620 910 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 NYNRINQ9P2P1 1898 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 KCNK3O14649 394 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ADH5P11766 374 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ERCC2P18074 760 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 SP100P23497 879 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 CASQ1P31415 396 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 GGCXP38435 758 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 SGSHP51688 502 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 NDST2P52849 883 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 YBEYP58557 167 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 RPS24P62847 133 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 PFKPQ01813 784 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 KLF1Q13351 362 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 TDGQ13569 410 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 SLC12A1Q13621 1099 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 TUBB2AQ13885 445 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 GRM2Q14416 872 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 GAB4Q2WGN9 574 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ITPRIPL2Q3MIP1 535 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ALFQ53S48 1182 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ZFYVE27Q5T4F4 411 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 SEL1L2Q5TEA6 688 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ANKS1BQ7Z6G8 1248 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 KIAA0907Q7Z7F0 614 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 PQLC3Q8N755 202 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 FIBINQ8TAL6 211 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ACTRT1Q8TDG2 376 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 RSAD2Q8WXG1 361 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 P2RY11Q96G91 374 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 MSANTD3Q96H12 275 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 TUBB2BQ9BVA1 445 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 BBS2Q9BXC9 721 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 KLC2Q9H0B6 622 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 EBF3Q9H4W6 596 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 BRD9Q9H8M2 597 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 KLHL11Q9NVR0 708 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 SAR1BQ9Y6B6 198 aa12.32□□□□□ -0.44
PDLIM5-220ENST00000514830 ILVBLA1L0T0 632 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 SCAMP3O14828 347 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 DAPK3O43293 454 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 TBL1XO60907 577 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 CNTN5O94779 1100 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 TJP3O95049 919 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 SRFP11831 508 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 TYRP14679 529 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 ARSAP15289 507 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 TGM2P21980 687 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 KCNA4P22459 653 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 AMPD1P23109 780 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 SERPINB6P35237 376 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 NR2C2P49116 596 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 IRAK1P51617 712 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 PLK1P53350 603 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 VCPP55072 806 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 C6orf118Q5T5N4 469 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 NCBP2-AS2Q69YL0 99 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 TRIM68Q6AZZ1 485 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 CXorf57Q6NSI4 855 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 LRRC49Q8IUZ0 686 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 PLD5Q8N7P1 536 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms