RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, human

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB3-205	ENST00000514469	COX16	Q9P0S2	106 aa		10.8	□□□□□ -0.68
HMGXB3-205	ENST00000514469	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.8	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ANGPTL2	Q9UKU9	493 aa		10.8	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ERVW-1	Q9UQF0	538 aa		10.8	□□□□□ -0.68
HMGXB3-205	ENST00000514469	CEP192	Q8TEP8	1941 aa		10.8	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ASPM	Q8IZT6	3477 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ZFHX4	Q86UP3	3567 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469		M0QYT0	321 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	OPHN1	O60890	802 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SIN3B	O75182	1162 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	TFE3	P19532	575 aa	Predicted RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ACSL1	P33121	698 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	IRAK1	P51617	712 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	PLK1	P53350	603 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ECT2L	Q008S8	904 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	NME3	Q13232	169 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	AUH	Q13825	339 aa	Known RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	C5orf22	Q49AR2	442 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	C9orf64	Q5T6V5	341 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	TAF3	Q5VWG9	929 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	FBXL22	Q6P050	247 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	USP30	Q70CQ3	517 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	FAM124A	Q86V42	546 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	XYLT1	Q86Y38	959 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	DHX40	Q8IX18	779 aa	Known RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	APCDD1	Q8J025	514 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	HDDC3	Q8N4P3	179 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	OR2I1P	Q8NGU4	316 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	C1orf216	Q8TAB5	229 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	RNF34	Q969K3	372 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	IGSF8	Q969P0	613 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	PGAP3	Q96FM1	320 aa	Predicted RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	RPRD1A	Q96P16	312 aa	Predicted RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ZDHHC5	Q9C0B5	715 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	BTBD1	Q9H0C5	482 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	PABPC3	Q9H361	631 aa	Known RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ARHGEF38	Q9NXL2	777 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	STAP1	Q9ULZ2	295 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SCML1	Q9UN30	329 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	HS3ST4	Q9Y661	456 aa		10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	MYO18A	Q92614	2054 aa	Known RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.79	□□□□□ -0.68
HMGXB3-205	ENST00000514469	FRY	Q5TBA9	3013 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	EDDM13	A0A1B0GTR0	161 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	TARSL2	A2RTX5	802 aa	Known RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	TTC34	A8MYJ7	566 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469		I6L893	689 aa	Predicted RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	BCAT2	O15382	392 aa	Predicted RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	PAGE1	O75459	146 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ADCY5	O95622	1261 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SEMA4F	O95754	770 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	MME	P08473	750 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	CD59	P13987	128 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	PDGFRA	P16234	1089 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	MZF1	P28698	734 aa	Predicted RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	CXCR3	P49682	368 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	KLK7	P49862	253 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SULT1E1	P49888	294 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	VASP	P50552	380 aa	Predicted RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	OXCT1	P55809	520 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	JAM2	P57087	298 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	NOMO3	P69849	1222 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	BNC1	Q01954	994 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	BRMS1L	Q5PSV4	323 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	RNF219	Q5W0B1	726 aa	Predicted RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	BNIPL	Q7Z465	357 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ERICH1	Q86X53	443 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ZNF677	Q86XU0	584 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ZNF683	Q8IZ20	524 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	C18orf8	Q96DM3	657 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ALG14	Q96F25	216 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	MIR1-1HG	Q9H1L0	117 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	VPS16	Q9H269	839 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	PDCL3	Q9H2J4	239 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SLC32A1	Q9H598	525 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SGK2	Q9HBY8	427 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	ANLN	Q9NQW6	1124 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	FANCL	Q9NW38	375 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SERGEF	Q9UGK8	458 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	EIF2B4	Q9UI10	523 aa	Known RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	NOCT	Q9UK39	431 aa	Known RBP	10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	VANGL2	Q9ULK5	521 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	WASF3	Q9UPY6	502 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SIK3	Q9Y2K2	1263 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	DAAM1	Q9Y4D1	1078 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SLCO1B1	Q9Y6L6	691 aa		10.78	□□□□□ -0.68
HMGXB3-205	ENST00000514469	SDK1	Q7Z5N4	2213 aa		10.77	□□□□□ -0.68
HMGXB3-205	ENST00000514469	WDFY3	Q8IZQ1	3526 aa		10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	C10orf142	B7Z368	130 aa		10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	EPHB6	O15197	1021 aa		10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	MID1	O15344	667 aa		10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	RNASEH1	O60930	286 aa	Known RBP	10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	CLDN11	O75508	207 aa		10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	TPM2	P07951	284 aa		10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	FLT3	P36888	993 aa		10.77	□□□□□ -0.69
HMGXB3-205	ENST00000514469	GGCX	P38435	758 aa		10.77	□□□□□ -0.69

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