RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 KAT14Q9H8E8 782 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ARHGEF3Q9NR81 526 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 CHST7Q9NS84 486 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ABCB8Q9NUT2 735 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 PLAGL2Q9UPG8 496 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 WTIPA6NIX2 430 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 FAM170BA6NMN3 283 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 F8VZ95 297 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 H0Y858 1186 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 PEX12O00623 359 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 SOCS6O14544 535 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 SYN3O14994 580 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 POLR2DO15514 142 aaKnown RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 GPRIN2O60269 458 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CYTIPO60759 359 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 DDAH2O95865 285 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 PDGFBP01127 241 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 ZNF853P0CG23 659 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 AGAP20933 346 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 SERPINA4P29622 427 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 IL13P35225 146 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 TXKP42681 527 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 GCLCP48506 637 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 PDE1AP54750 535 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 RAC3P60763 192 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CDC42EP1Q00587 391 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 DOC2AQ14183 400 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 HYAL4Q2M3T9 481 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 ZNF792Q3KQV3 632 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 DCAF12L1Q5VU92 463 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 NCEH1Q6PIU2 408 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 GAREM2Q75VX8 874 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CCDC80Q76M96 950 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 KBTBD6Q86V97 674 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CCDC13Q8IYE1 715 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CCDC105Q8IYK2 499 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CARFQ8N187 725 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 WASF1Q92558 559 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 TNPO1Q92973 898 aaKnown RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 TUBGCP5Q96RT8 1024 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 ZNF518BQ9C0D4 1074 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 RNF32Q9H0A6 362 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 PLEKHA2Q9HB19 425 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 P4HTMQ9NXG6 502 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 SPASTQ9UBP0 616 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 ZNF70Q9UC06 446 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 RCOR1Q9UKL0 485 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CHKBQ9Y259 395 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 MED16Q9Y2X0 877 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 TEX264Q9Y6I9 313 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 TNIKQ9UKE5 1360 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 NPHP3-ACAD11A0A0J9YXS1 232 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 PRR19A6NJB7 356 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A27PA6NNH2 459 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 H0YIN7 160 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 H0YIV9 168 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 BIN1O00499 593 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CXCL11O14625 94 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 MAPK13O15264 365 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 SPRY1O43609 319 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 SIGLEC6O43699 453 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 RECQL5O94762 991 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 AKR7A3O95154 331 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 PENKP01210 267 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 EIF2S1P05198 315 aaKnown RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 ETS1P14921 441 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 MC5RP33032 325 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 USP8P40818 1118 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 KCNJ1P48048 391 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 FNTBP49356 437 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 UBE2HP62256 183 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 TLE1Q04724 770 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 SCN1BQ07699 218 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 CYP2A13Q16696 494 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 FIGNQ5HY92 759 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 RINT1Q6NUQ1 792 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 PPP1R21Q6ZMI0 780 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 C1orf186Q6ZWK4 172 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 FAM90A1Q86YD7 464 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 MPP5Q8N3R9 675 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 TOP6BLQ8N6T0 577 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 KDM1BQ8NB78 822 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 ALG14Q96F25 216 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 LINC00615Q96LM1 132 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 PIMREGQ9BSJ6 248 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 HEMGNQ9BXL5 484 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 NFKBIZQ9BYH8 718 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 STN1Q9H668 368 aaKnown RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 C17orf75Q9HAS0 396 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 HEYLQ9NQ87 328 aaPredicted RBP6.48□□□□□ -1.37
CHD1-208ENST00000512392 TMOD3Q9NYL9 352 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 AGAP1Q9UPQ3 857 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 NFS1Q9Y697 457 aa6.48□□□□□ -1.37
CHD1-208ENST00000512392 ADGRF5Q8IZF2 1346 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 TSPAN4O14817 238 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 CETN3O15182 167 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 SLCO2B1O94956 709 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 ALDH1B1P30837 517 aa6.47□□□□□ -1.37
CHD1-208ENST00000512392 LIG4P49917 911 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms