RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 NFKB1P19838 968 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 AQP5P55064 265 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 PLD1Q13393 1074 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 BRMS1LQ5PSV4 323 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 POLR1EQ9GZS1 481 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 HIPK3Q9H422 1215 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 UBA2Q9UBT2 640 aaPredicted RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 SFMBT1Q9UHJ3 866 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ABCE1P61221 599 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ITGA9Q13797 1035 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ARHGAP17Q68EM7 881 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 SETD3Q86TU7 594 aaPredicted RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ATAD1Q8NBU5 361 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 LMO3Q8TAP4 145 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 EBNA1BP2Q99848 306 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 TBL1YQ9BQ87 522 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 APOL5Q9BWW9 433 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ZYG11BQ9C0D3 744 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CYP4F12Q9HCS2 524 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 MRPL17Q9NRX2 175 aaKnown RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 RCOR3Q9P2K3 495 aaPredicted RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 DNMT3LQ9UJW3 386 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 MYO1DO94832 1006 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ERVK-10P10266 1014 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 B3GNT9Q6UX72 402 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CRELD2Q6UXH1 353 aaPredicted RBP13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 EXOC3L1Q86VI1 746 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 NETO2Q8NC67 525 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 USP6NLQ92738 828 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 NCLNQ969V3 563 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 RMDN2Q96LZ7 410 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 HAUS8Q9BT25 410 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CIPCQ9C0C6 399 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 CLPBQ9H078 707 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 PKD2L2Q9NZM6 624 aa13.39□□□□□ -0.27
PCDHA4-202ENST00000512229 MDM4O15151 490 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 TLR5O60602 858 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 BANF1O75531 89 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 ITGALP20701 1170 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 OR1D2P34982 312 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 SOWAHAQ2M3V2 549 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 SPDYAQ5MJ70 313 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 CPNE8Q86YQ8 564 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 PCYOX1LQ8NBM8 494 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 LPCAT1Q8NF37 534 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 PCED1BQ96HM7 432 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 RNF39Q9H2S5 420 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 ORC6Q9Y5N6 252 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 TMCC1O94876 653 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 UBOX5O94941 541 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 OR4Q2P0C623 313 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 POU4F1Q01851 419 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 PDCD2Q16342 344 aaPredicted RBP13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 INTS6LQ5JSJ4 861 aaKnown RBP13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 C6orf10Q5SRN2 563 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 NEPROQ6NW34 567 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 TAS1R3Q7RTX0 852 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 MTDHQ86UE4 582 aaKnown RBP13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 DTX3LQ8TDB6 740 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 ZNF75CPQ92670 426 aaPredicted RBP13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 CENPTQ96BT3 561 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 TWNKQ96RR1 684 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 TTPALQ9BTX7 342 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 HMGXB4Q9UGU5 601 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 MPOP05164 745 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 CD48P09326 243 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 CSE1LP55060 971 aaKnown RBP13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 DUSP4Q13115 394 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 MTFR1Q15390 333 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 PSMD5Q16401 504 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 LRRC8DQ7L1W4 858 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 C12orf50Q8NA57 414 aaPredicted RBP13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 NEUROG2Q9H2A3 272 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 TRMT13Q9NUP7 481 aaKnown RBP13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 GTF2IRD1Q9UHL9 959 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 HAO1Q9UJM8 370 aa13.38□□□□□ -0.27
PCDHA4-202ENST00000512229 MOXD2PA6NHM9 499 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 TRIM13O60858 407 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 H2AFYO75367 372 aaKnown RBP13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 SKAP2O75563 359 aaPredicted RBP13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 DDHD2O94830 711 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 ESRRBO95718 433 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 CFHP08603 1231 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 HDCP19113 662 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 WEE1P30291 646 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 SCTRP47872 440 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 NAB1Q13506 487 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 SCARA3Q6AZY7 606 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 SLC25A13Q9UJS0 675 aa13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
PCDHA4-202ENST00000512229 SERPINH1P50454 418 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms