RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 TBCAO75347 108 aaKnown RBP11.23□□□□□ -0.61
SNF8-207ENST00000509995 BEST1O76090 585 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 CLDN1O95832 211 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 LDHAP00338 332 aaKnown RBP11.23□□□□□ -0.61
SNF8-207ENST00000509995 TNNC2P02585 160 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 PRKCGP05129 697 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 FAM163BP0C2L3 166 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 HGFP14210 728 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 C5AR1P21730 350 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 GNLYP22749 145 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 DDIT3P35638 169 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 TNNC1P63316 161 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 GUCY1B3Q02153 619 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 DRAP1Q14919 205 aaPredicted RBP11.23□□□□□ -0.61
SNF8-207ENST00000509995 TMEM119Q4V9L6 283 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 SETMARQ53H47 684 aaPredicted RBP11.23□□□□□ -0.61
SNF8-207ENST00000509995 GPRIN1Q7Z2K8 1008 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 B3GNT8Q7Z7M8 397 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 TADA2BQ86TJ2 420 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 TRIM69Q86WT6 500 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 ZFAND4Q86XD8 727 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 FUKQ8N0W3 1084 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 CDK5RAP3Q96JB5 506 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 SYNDIG1Q9H7V2 258 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 CSNK1G1Q9HCP0 422 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 PISDQ9UG56 409 aa11.23□□□□□ -0.61
SNF8-207ENST00000509995 PRAMEF33A0A0G2JMD5 474 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 GOLGA8IPA6NC78 632 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 VWA3AA6NCI4 1184 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 GOLGA8JA6NMD2 632 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 NTN3O00634 580 aaPredicted RBP11.22□□□□□ -0.61
SNF8-207ENST00000509995 PRAMEF10O60809 474 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 VPS4BO75351 444 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 DDAH2O95865 285 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 ADH1BP00325 375 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 JMJD7P0C870 316 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 POLR2EP19388 210 aaKnown RBP11.22□□□□□ -0.61
SNF8-207ENST00000509995 DRD3P35462 400 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 PRPHP41219 470 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 MAP3K7CLP57077 242 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 ST8SIA6P61647 398 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 HNRNPKP61978 463 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNF8-207ENST00000509995 KLRB1Q12918 225 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 NR0B2Q15466 257 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 MPPE1Q53F39 396 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 C9orf64Q5T6V5 341 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 DTHD1Q6ZMT9 781 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 GALNT11Q8NCW6 608 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 ZNF548Q8NEK5 533 aaPredicted RBP11.22□□□□□ -0.61
SNF8-207ENST00000509995 FAM131CQ96AQ9 280 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 HVCN1Q96D96 273 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 IFT43Q96FT9 208 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 MYOCQ99972 504 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 CALN1Q9BXU9 219 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 FOXP1Q9H334 677 aaPredicted RBP11.22□□□□□ -0.61
SNF8-207ENST00000509995 DKK3Q9UBP4 350 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 RASAL2Q9UJF2 1139 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 NAGPAQ9UK23 515 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 VPS4AQ9UN37 437 aa11.22□□□□□ -0.61
SNF8-207ENST00000509995 SVILO95425 2214 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 SHANK1Q9Y566 2161 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 A0A1W2PQ27 194 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 A0A1W2PQ64 194 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 A0A1W2PQC6 194 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 MUSKO15146 869 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 PLRG1O43660 514 aaKnown RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 JAK2O60674 1132 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 RNGTTO60942 597 aaKnown RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 PPP1R37O75864 691 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 PRPF6O94906 941 aaKnown RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 KCNA1Q09470 495 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 DUOXA2Q1HG44 320 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 WDR72Q3MJ13 1102 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 LACTB2Q53H82 288 aaPredicted RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 SLC22A18ASQ8N1D0 253 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 OR13H1Q8NG92 308 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 WFDC5Q8TCV5 224 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 NAT6Q93015 286 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 POM121Q96HA1 1249 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 CDK5RAP1Q96SZ6 601 aaKnown RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 FAM129BQ96TA1 746 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 CCDC3Q9BQI4 270 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 STRADBQ9C0K7 418 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 DNAJC28Q9NX36 388 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 FOXJ2Q9P0K8 574 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 SALL4Q9UJQ4 1053 aa11.21□□□□□ -0.61
SNF8-207ENST00000509995 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.61
SNF8-207ENST00000509995 UNC13CQ8NB66 2214 aa11.21□□□□□ -0.62
SNF8-207ENST00000509995 TARSL2A2RTX5 802 aaKnown RBP11.2□□□□□ -0.62
SNF8-207ENST00000509995 PRR19A6NJB7 356 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 D6RAR5 112 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 TMX2-CTNND1H3BSU7 103 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 RALAP11233 206 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 CCDC130P13994 396 aa11.2□□□□□ -0.62
SNF8-207ENST00000509995 GARTP22102 1010 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms