RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 HLA-FP30511 346 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 OR1E1P30953 314 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 NTSR1P30989 418 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 HOXA6P31267 233 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 TIE1P35590 1138 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 SLC1A1P43005 524 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 KIR2DL1P43626 348 aaPredicted RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 MAPKAPK2P49137 400 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 SGSHP51688 502 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 DGKEP52429 567 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 ATXN1P54253 815 aaKnown RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 SEC13P55735 322 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 ST8SIA6P61647 398 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 OGDHQ02218 1023 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 FZD5Q13467 585 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 STARD3Q14849 445 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 TCEAL1Q15170 157 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 IFI16Q16666 785 aaKnown RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 C2orf27AQ580R0 203 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 SH3PXD2AQ5TCZ1 1133 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 RWDD4Q6NW29 188 aaKnown RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 KIAA1328Q86T90 577 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 CHPFQ8IZ52 775 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 CCDC185Q8N715 623 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 KDM1BQ8NB78 822 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 SLC35G2Q8TBE7 412 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 TEKT4Q8WW24 435 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 C2orf49Q9BVC5 232 aaPredicted RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 MUC3BQ9H195 1237 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 ZWILCHQ9H900 591 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 FBRSL1Q9HCM7 1045 aaKnown RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 PRMT8Q9NR22 394 aaPredicted RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 ELOVL2Q9NXB9 296 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 RAPGEFL1Q9UHV5 662 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 FZD10Q9ULW2 581 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 MMP17Q9ULZ9 603 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 TBC1D30Q9Y2I9 924 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 PCDHA13Q9Y5I0 950 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 WDFY4Q6ZS81 3184 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 CCDC163A0A0D9SF12 145 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ILVBLA1L0T0 632 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 SOWAHDA6NJG2 315 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ARHGAP6O43182 974 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 DAPK3O43293 454 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 PROSCO94903 275 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 KLF8O95600 359 aaPredicted RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 APBB3O95704 486 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 C7P10643 843 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 EPHB2P29323 1055 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ARL4AP40617 200 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 SSR1P43307 286 aaKnown RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 NOP2P46087 812 aaKnown RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 GEMIN4P57678 1058 aaKnown RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 TPI1P60174 286 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ZNF252P-AS1Q0IIN9 211 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 LMAN2Q12907 356 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ANGPT1Q15389 498 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 GEN1Q17RS7 908 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ODF2Q5BJF6 829 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 PITRM1Q5JRX3 1037 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 MBLAC2Q68D91 279 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 SERPINA13PQ6UXR4 307 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 Q6ZS52 159 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 KIAA0907Q7Z7F0 614 aaPredicted RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 METTL3Q86U44 580 aaKnown RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 DNAAF5Q86Y56 855 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 MAP7D3Q8IWC1 876 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ALLCQ8N6M5 410 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 IL17RCQ8NAC3 791 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 TXNDC5Q8NBS9 432 aaKnown RBP9.4□□□□□ -0.9
NUP54-207ENST00000508583 TSTD1Q8NFU3 115 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 SLC39A7Q92504 469 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 ARHGEF26Q96DR7 871 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 PACSIN1Q9BY11 444 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 TSGA10Q9BZW7 698 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 FBRSQ9HAH7 460 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 PCSK1NQ9UHG2 260 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 SLC25A13Q9UJS0 675 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 VPS28Q9UK41 221 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 HPCAL4Q9UM19 191 aa9.4□□□□□ -0.9
NUP54-207ENST00000508583 MYO18AQ92614 2054 aaKnown RBP9.4□□□□□ -0.91
NUP54-207ENST00000508583 DOCK4Q8N1I0 1966 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 BTNL10A8MVZ5 291 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 PRRT4C9JH25 899 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 H3BRJ5 948 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 EEF2KO00418 725 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 CREB3O43889 395 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 RAMP2O60895 175 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 LRIG2O94898 1065 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 SRPRAP08240 638 aaKnown RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 HOXB2P14652 356 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 HOXC13P31276 330 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 GGCXP38435 758 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 CSKP41240 450 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 HCAR3P49019 387 aa9.39□□□□□ -0.91
NUP54-207ENST00000508583 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
NUP54-207ENST00000508583 VAV2P52735 878 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms