RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ADPRHP54922 357 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 SLC8A3P57103 927 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 NFKB2Q00653 900 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 ENPEPQ07075 957 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 OVGP1Q12889 678 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 NFATC3Q12968 1075 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 STK4Q13043 487 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 CUL4BQ13620 913 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 BSPRYQ5W0U4 402 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 CEP135Q66GS9 1140 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 SND1Q7KZF4 910 aaKnown RBP eCLIP9.75□□□□□ -0.85
NEDD9-211ENST00000508546 SPATS2Q86XZ4 545 aaKnown RBP9.75□□□□□ -0.85
NEDD9-211ENST00000508546 MMAAQ8IVH4 418 aaKnown RBP9.75□□□□□ -0.85
NEDD9-211ENST00000508546 LSMEM2Q8N112 164 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 KIAA0895Q8NCT3 520 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 FIBINQ8TAL6 211 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 TAS1R2Q8TE23 839 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 RNF139Q8WU17 664 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 MRGPRX3Q96LB0 322 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 OMDQ99983 421 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 ULBP1Q9BZM6 244 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 MTMR6Q9Y217 621 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 FRMD4BQ9Y2L6 1034 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 ITIH6Q6UXX5 1313 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 COL27A1Q8IZC6 1860 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 TRPM6Q9BX84 2022 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 EDDM13A0A1B0GTR0 161 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 ENO4A6NNW6 628 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 XPO1O14980 1071 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 KLRC4O43908 158 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 TBL1XO60907 577 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 YEATS4O95619 227 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 ADH1BP00325 375 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 SRPRAP08240 638 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 C5AR1P21730 350 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 CSKP41240 450 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 RAD23BP54727 409 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 ERVPABLB-1P60509 514 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 PPP3CAQ08209 521 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 ZNF211Q13398 564 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 FAM133BQ5BKY9 247 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 KIAA1614Q5VZ46 1190 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 NUGGCQ68CJ6 796 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 NAPEPLDQ6IQ20 393 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 MSANTD2Q6P1R3 559 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 RFWD3Q6PCD5 774 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 KDM7AQ6ZMT4 941 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 INTS8Q75QN2 995 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 MFN1Q8IWA4 741 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 UNC45BQ8IWX7 931 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 DHX40Q8IX18 779 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 SCML4Q8N228 414 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 AADATQ8N5Z0 425 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 CCDC150Q8NCX0 1101 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 OR14C36Q8NHC7 312 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 NDRG1Q92597 394 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 AZIN2Q96A70 460 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 FAM131CQ96AQ9 280 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 FAM129BQ96TA1 746 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 ABCC13Q9NSE7 274 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 ARHGAP20Q9P2F6 1191 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 INTS6Q9UL03 887 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 DMTF1Q9Y222 760 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 TRAF3IP3Q9Y228 551 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 SSUH2Q9Y2M2 353 aa9.74□□□□□ -0.85
NEDD9-211ENST00000508546 HEMK1Q9Y5R4 338 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 UTP20O75691 2785 aaKnown RBP9.74□□□□□ -0.85
NEDD9-211ENST00000508546 YJEFN3A6XGL0 299 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 E7ENQ6 273 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 TULP2O00295 520 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 MSI1O43347 362 aaKnown RBP9.73□□□□□ -0.85
NEDD9-211ENST00000508546 SIGLEC6O43699 453 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 ACSL4O60488 711 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 MYF5P13349 255 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 CR2P20023 1033 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 SLC6A4P31645 630 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 AFMP43652 599 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 LSSP48449 732 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 GCLMP48507 274 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 SLC11A2P49281 568 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 MCCD1P59942 119 aaPredicted RBP9.73□□□□□ -0.85
NEDD9-211ENST00000508546 PPP2CBP62714 309 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 PPP2CAP67775 309 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 ADIGQ0VDE8 80 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
NEDD9-211ENST00000508546 NFIL3Q16649 462 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 CDCP2Q5VXM1 449 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 PRPF39Q86UA1 669 aaKnown RBP9.73□□□□□ -0.85
NEDD9-211ENST00000508546 HJURPQ8NCD3 748 aaPredicted RBP9.73□□□□□ -0.85
NEDD9-211ENST00000508546 OR4C6Q8NH72 309 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 EDEM1Q92611 657 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 IPO9Q96P70 1041 aaKnown RBP9.73□□□□□ -0.85
NEDD9-211ENST00000508546 DPH1Q9BZG8 443 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 LRRC4Q9HBW1 653 aa9.73□□□□□ -0.85
NEDD9-211ENST00000508546 TMEM8AQ9HCN3 771 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms