RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CHSY1Q86X52 802 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
LMNA-222ENST00000508500 ZNF557Q8N988 423 aaPredicted RBP16.76■□□□□ 0.27
LMNA-222ENST00000508500 OR52K2Q8NGK3 314 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 CAMK1GQ96NX5 476 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 ORAI3Q9BRQ5 295 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 MIR1-1HGQ9H1L0 117 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 IL21RQ9HBE5 538 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 ANLNQ9NQW6 1124 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 COX16Q9P0S2 106 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 SERGEFQ9UGK8 458 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 ERVW-1Q9UQF0 538 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 FHOD1Q9Y613 1164 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 FREM2Q5SZK8 3169 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 FAM170AA1A519 330 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 H0Y626 953 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 I6L893 689 aaPredicted RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 HSF2BPO75031 334 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 ASLP04424 464 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 GNSP15586 552 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 MZF1P28698 734 aaPredicted RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 CDH5P33151 784 aaPredicted RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 CDK17Q00537 523 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 SLC6A3Q01959 620 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 DRAP1Q14919 205 aaPredicted RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 C9orf64Q5T6V5 341 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 FBXL22Q6P050 247 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 C11orf57Q6ZUT1 292 aaPredicted RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 CCAR2Q8N163 923 aaKnown RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 ATP6V0D2Q8N8Y2 350 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 PTPRN2Q92932 1015 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 BIRC7Q96CA5 298 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 FAM129BQ96TA1 746 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 FAM204AQ9H8W3 233 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 FBRSQ9HAH7 460 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 DDIT4Q9NX09 232 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 KIAA1522Q9P206 1035 aaPredicted RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 ZMIZ1Q9ULJ6 1067 aa16.75■□□□□ 0.27
LMNA-222ENST00000508500 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.75■□□□□ 0.27
LMNA-222ENST00000508500 ZFYVE26Q68DK2 2539 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 TYW5A2RUC4 315 aaKnown RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 C10orf142B7Z368 130 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 F5H5T6 163 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 BCAT2O15382 392 aaPredicted RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 DAB1O75553 588 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 DNTTP04053 509 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 SRPRAP08240 638 aaKnown RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 KRT9P35527 623 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 GGCXP38435 758 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 STK19P49842 368 aaPredicted RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 CENPCQ03188 943 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 ZBTB16Q05516 673 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 KCNJ12Q14500 433 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 ARTNQ5T4W7 220 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 ZNF776Q68DI1 518 aaPredicted RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 CXorf57Q6NSI4 855 aaKnown RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 SLC26A9Q7LBE3 791 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 C14orf80Q86SX3 495 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 FAM114A1Q8IWE2 563 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 KDM1BQ8NB78 822 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 ZNF397Q8NF99 534 aaPredicted RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 ALG14Q96F25 216 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 RPL10LQ96L21 214 aaKnown RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 SCNM1Q9BWG6 230 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 PCED1AQ9H1Q7 454 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 PABPC3Q9H361 631 aaKnown RBP16.74■□□□□ 0.27
LMNA-222ENST00000508500 SLC32A1Q9H598 525 aa16.74■□□□□ 0.27
LMNA-222ENST00000508500 DSPP15924 2871 aaKnown RBP16.73■□□□□ 0.27
LMNA-222ENST00000508500 SH3BP5O60239 455 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 SEMA4FO95754 770 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 CAPNS1P04632 268 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 CYP11B1P15538 503 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 PDGFRAP16234 1089 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 CCR1P32246 355 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 NOS2P35228 1153 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 PLK1P53350 603 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 ST8SIA6P61647 398 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 ECT2LQ008S8 904 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 NME3Q13232 169 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 NPY6RQ99463 290 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 BTBD1Q9H0C5 482 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 EBF2Q9HAK2 575 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 PIGVQ9NUD9 493 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 HS3ST4Q9Y661 456 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 NBEAQ8NFP9 2946 aa16.73■□□□□ 0.27
LMNA-222ENST00000508500 ARID1BQ8NFD5 2236 aaPredicted RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 A0A1B0GVT2 93 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 TARSL2A2RTX5 802 aaKnown RBP16.72■□□□□ 0.27
LMNA-222ENST00000508500 TMEM8BA6NDV4 472 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 M0QYT0 321 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 MID1O15344 667 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 PAGE1O75459 146 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 IGHV4-34P06331 123 aa16.72■□□□□ 0.27
LMNA-222ENST00000508500 UCHL3P15374 230 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms