RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RHPN2Q8IUC4 686 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 ENDOVQ8N8Q3 282 aaKnown RBP3.83□□□□□ -1.8
LSM6-205ENST00000507449 PNLDC1Q8NA58 520 aaKnown RBP3.83□□□□□ -1.8
LSM6-205ENST00000507449 LSM14AQ8ND56 463 aaKnown RBP3.83□□□□□ -1.8
LSM6-205ENST00000507449 ZNF398Q8TD17 642 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 C2CD4CQ8TF44 421 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 IGFBPL1Q8WX77 278 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 STAMQ92783 540 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 KCNJ9Q92806 393 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 HVCN1Q96D96 273 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 ZBTB10Q96DT7 871 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 CHFRQ96EP1 664 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 RNFT2Q96EX2 444 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 ZNF347Q96SE7 839 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 SENP7Q9BQF6 1050 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 TM2D2Q9BX73 214 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 CTDSP1Q9GZU7 261 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 R3HDMLQ9H3Y0 253 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 STN1Q9H668 368 aaKnown RBP3.83□□□□□ -1.8
LSM6-205ENST00000507449 SFXN1Q9H9B4 322 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 TXNRD2Q9NNW7 524 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 THAP1Q9NVV9 213 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 C11orf21Q9P2W6 132 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 HDAC6Q9UBN7 1215 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 KLQ9UEF7 1012 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 CD207Q9UJ71 328 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 PKP3Q9Y446 797 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 INSL6Q9Y581 213 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 LMTK3Q96Q04 1460 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 SPATA31A5Q5VU36 1347 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 SPATA31A6Q5VVP1 1343 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 SPATA31A7Q8IWB4 1347 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 PEX12O00623 359 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 DSCR3O14972 297 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 EPB41L2O43491 1005 aaKnown RBP3.82□□□□□ -1.8
LSM6-205ENST00000507449 TSPAN3O60637 253 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 IGLV2-14P01704 120 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 CD4P01730 458 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 ENO1P06733 434 aaKnown RBP3.82□□□□□ -1.8
LSM6-205ENST00000507449 ADPRHP54922 357 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 ZBTB16Q05516 673 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 SMN1Q16637 294 aaKnown RBP3.82□□□□□ -1.8
LSM6-205ENST00000507449 TMEM119Q4V9L6 283 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 SH2D4BQ5SQS7 431 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 LIPMQ5VYY2 423 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 DENND1BQ6P3S1 775 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 TMED8Q6PL24 325 aaPredicted RBP3.82□□□□□ -1.8
LSM6-205ENST00000507449 ZNF575Q86XF7 245 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 ANKRD44Q8N8A2 993 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 FAM110DQ8TAY7 271 aaPredicted RBP3.82□□□□□ -1.8
LSM6-205ENST00000507449 FCRL5Q96RD9 977 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 CLSTN3Q9BQT9 956 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 ABHD14AQ9BUJ0 271 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 GDAQ9Y2T3 454 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 TMEM98Q9Y2Y6 226 aa3.82□□□□□ -1.8
LSM6-205ENST00000507449 WIPF3A6NGB9 483 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 TMEM232C9JQI7 657 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 MCIDASD6RGH6 385 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 UBE2Q2LH0YL09 131 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 METTL18O95568 372 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ST6GAL1P15907 406 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 XBP1P17861 261 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 TGM2P21980 687 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 HOXA7P31268 230 aaPredicted RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 CCT4P50991 539 aaKnown RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 YPEL5P62699 121 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 GALNT2Q10471 571 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ALKBH1Q13686 389 aaKnown RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 PFKFB3Q16875 520 aaPredicted RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ANXA2RQ3ZCQ2 193 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 GXYLT1Q4G148 440 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 CC2D1BQ5T0F9 858 aaKnown RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 UBAP2Q5T6F2 1119 aaKnown RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 FCRLBQ6BAA4 426 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 NAPEPLDQ6IQ20 393 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 DHRS13Q6UX07 377 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ZNF782Q6ZMW2 699 aaPredicted RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 RBM44Q6ZP01 1051 aaKnown RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 TMEM200AQ86VY9 491 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 VPS52Q8N1B4 723 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 BOLLQ8N9W6 283 aaKnown RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 C8orf58Q8NAV2 365 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 PCYOX1LQ8NBM8 494 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ADPRHL1Q8NDY3 354 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 OR52N4Q8NGI2 321 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ST8SIA4Q92187 359 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ELP4Q96EB1 424 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ASB2Q96Q27 587 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 EFHD1Q9BUP0 239 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 SLC26A6Q9BXS9 759 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 FRMD8Q9BZ67 464 aaPredicted RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 PAIP1Q9H074 479 aaKnown RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 TTYH1Q9H313 450 aaPredicted RBP3.81□□□□□ -1.8
LSM6-205ENST00000507449 ACAD9Q9H845 621 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 ARL8BQ9NVJ2 186 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.81□□□□□ -1.8
LSM6-205ENST00000507449 TMEM248Q9NWD8 314 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 FBXO4Q9UKT5 387 aa3.81□□□□□ -1.8
LSM6-205ENST00000507449 TBX20Q9UMR3 447 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms