RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 CTAGE15A4D2H0 777 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 CTAGE9A4FU28 777 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 ANTXRLA6NF34 631 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 YJEFN3A6XGL0 299 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 E7ENQ6 273 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 KIAA0754O94854 1291 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 CYBBP04839 570 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 CTAGE8P0CG41 777 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 CORO1AP31146 461 aaKnown RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 P2RY2P41231 377 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 DPP6P42658 865 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 SSR1P43307 286 aaKnown RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 HARS2P49590 506 aaKnown RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 MNAT1P51948 309 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 UBASH3AP57075 661 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 DAOAP59103 153 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 APBA1Q02410 837 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 KDSRQ06136 332 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 ADIGQ0VDE8 80 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 CRYMQ14894 314 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 ZKSCAN8Q15776 578 aaPredicted RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 MPPE1Q53F39 396 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 ADGRF1Q5T601 910 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 FYB2Q5VWT5 728 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 ANO7Q6IWH7 933 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 PMF1Q6P1K2 205 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 BEND5Q7L4P6 421 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 CTAGE6Q86UF2 777 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 DENND1CQ8IV53 801 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 SFTPA1Q8IWL2 248 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 CTAGE4Q8IX94 777 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 RBBP8NLQ8NC74 664 aaPredicted RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 MDGA1Q8NFP4 955 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 DDX1Q92499 740 aaKnown RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 KREMEN1Q96MU8 473 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 GABRG3Q99928 467 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 ZSWIM1Q9BR11 485 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 UBE2TQ9NPD8 197 aaPredicted RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 TMPRSS4Q9NRS4 437 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 HCN2Q9UL51 889 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 SUFUQ9UMX1 484 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 SDK1Q7Z5N4 2213 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 A0A1W2PQF6 199 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 PRRT4C9JH25 899 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 GOLGA8KD6RF30 607 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 DCLK1O15075 740 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 TRIM24O15164 1050 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 SPINT1O43278 529 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 SART1O43290 800 aaKnown RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 MED7O43513 233 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 LILRA1O75019 489 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 ZNF217O75362 1048 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 FSBPO95073 299 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 SERPINC1P01008 464 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 NEFHP12036 1026 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 LCP1P13796 627 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 ERCC5P28715 1186 aaPredicted RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 GBP1P32455 592 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 MPLP40238 635 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 GPD2P43304 727 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 ACADSBP45954 432 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 MFAP3P55082 362 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 RING1Q06587 406 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 CKAP4Q07065 602 aaKnown RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 IFFO1Q0D2I5 559 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 TBX2Q13207 712 aaPredicted RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 ENPP2Q13822 863 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 CASP8Q14790 479 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 EIF4HQ15056 248 aaKnown RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 MAP7D1Q3KQU3 841 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 MPP7Q5T2T1 576 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 PMS2CLQ68D20 193 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 SPECC1LQ69YQ0 1117 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 MSANTD2Q6P1R3 559 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 LRRC31Q6UY01 552 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 TOGARAM2Q6ZUX3 1019 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 TMEM110Q86TL2 294 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 IRF2BP1Q8IU81 584 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 ARHGEF19Q8IW93 802 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 UNC45BQ8IWX7 931 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 CHPFQ8IZ52 775 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 PGBD3Q8N328 593 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 KDF1Q8NAX2 398 aaPredicted RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 C1orf131Q8NDD1 294 aaKnown RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 FAM76AQ8TAV0 307 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 DDI1Q8WTU0 396 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 UCMAQ8WVF2 138 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 ZNF606Q8WXB4 792 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 NDRG1Q92597 394 aaKnown RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 KAT5Q92993 513 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 TMA16Q96EY4 203 aaKnown RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 PIWIL1Q96J94 861 aaKnown RBP8.33□□□□□ -1.08
SCN1A-207ENST00000507401 SPACA7Q96KW9 195 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 MED15Q96RN5 788 aa8.33□□□□□ -1.08
SCN1A-207ENST00000507401 TRIM62Q9BVG3 475 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms