RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 KLK6Q92876 244 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 RNF34Q969K3 372 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 NUCKS1Q9H1E3 243 aaKnown RBP8.55□□□□□ -1.04
SNF8-204ENST00000506104 RSPH9Q9H1X1 276 aaPredicted RBP8.55□□□□□ -1.04
SNF8-204ENST00000506104 CNGB3Q9NQW8 809 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 TJP2Q9UDY2 1190 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 RCOR1Q9UKL0 485 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 SCML1Q9UN30 329 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 ZZEF1O43149 2961 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 TLR4O00206 839 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 FFAR2O15552 330 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 TLX3O43711 291 aaPredicted RBP8.54□□□□□ -1.04
SNF8-204ENST00000506104 RTN2O75298 545 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 RHOBTB3O94955 611 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 LUC7L3O95232 432 aaKnown RBP8.54□□□□□ -1.04
SNF8-204ENST00000506104 LATS1O95835 1130 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 MYL1P05976 194 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 SETSIPP0DME0 302 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 KRT5P13647 590 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 PDGFRAP16234 1089 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 GLDCP23378 1020 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 PPP2CBP62714 309 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 PPP2CAP67775 309 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 KRT85P78386 507 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 ECT2LQ008S8 904 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 DPYDQ12882 1025 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 STAT4Q14765 748 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 HNRNPA1L2Q32P51 320 aaKnown RBP8.54□□□□□ -1.04
SNF8-204ENST00000506104 CCDC40Q4G0X9 1142 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 CBWD6Q4V339 395 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 FSCBQ5H9T9 825 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 CBWD3Q5JTY5 395 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 CBWD5Q5RIA9 395 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 ATL3Q6DD88 541 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 NADSYN1Q6IA69 706 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 KRBA2Q6ZNG9 492 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 BHLHA9Q7RTU4 235 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 TMC6Q7Z403 805 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 ZNF605Q86T29 641 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 CIR1Q86X95 450 aaPredicted RBP8.54□□□□□ -1.04
SNF8-204ENST00000506104 APCDD1Q8J025 514 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 PPM1KQ8N3J5 372 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 GUF1Q8N442 669 aaKnown RBP8.54□□□□□ -1.04
SNF8-204ENST00000506104 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.54□□□□□ -1.04
SNF8-204ENST00000506104 ZNF557Q8N988 423 aaPredicted RBP8.54□□□□□ -1.04
SNF8-204ENST00000506104 TFAP2BQ92481 460 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 CCDC34Q96HJ3 373 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 PRICKLE1Q96MT3 831 aaPredicted RBP8.54□□□□□ -1.04
SNF8-204ENST00000506104 NT5C1BQ96P26 610 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 LGMNQ99538 433 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 OSBPL2Q9H1P3 480 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 EBF2Q9HAK2 575 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 DKK4Q9UBT3 224 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 SLCO3A1Q9UIG8 710 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 NAALADL1Q9UQQ1 740 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 CA5BQ9Y2D0 317 aa8.54□□□□□ -1.04
SNF8-204ENST00000506104 COL5A1P20908 1838 aaPredicted RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 A0A087WV48 116 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 O00370 1275 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 YKT6O15498 198 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 IRAK2O43187 625 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 BRINP1O60477 761 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 ADH1BP00325 375 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 VAV1P15498 845 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 GOT1P17174 413 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 TBXAS1P24557 533 aaPredicted RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 EPHA8P29322 1005 aaPredicted RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 ACTN2P35609 894 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 ACADVLP49748 655 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 ADPRHP54922 357 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 PNOCQ13519 176 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 KCNJ12Q14500 433 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 NFIL3Q16649 462 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 EDRF1Q3B7T1 1238 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 DCAF6Q58WW2 860 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 FAM133BQ5BKY9 247 aaKnown RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 ZC3H12AQ5D1E8 599 aaKnown RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 C9orf64Q5T6V5 341 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 ISM2Q6H9L7 571 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 PMF1Q6P1K2 205 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 FOXR1Q6PIV2 292 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 RRAGAQ7L523 313 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 CREBRFQ8IUR6 639 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 AADATQ8N5Z0 425 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 FIBINQ8TAL6 211 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 DQX1Q8TE96 717 aaKnown RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 SAP25Q8TEE9 199 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 KCTD13Q8WZ19 329 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 TTC17Q96AE7 1141 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 MYEOVQ96EZ4 313 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 SERPINB11Q96P15 392 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 FAM204AQ9H8W3 233 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 ARMCX3Q9UH62 379 aaPredicted RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 XPO7Q9UIA9 1087 aaKnown RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 SLC25A13Q9UJS0 675 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 INTS6Q9UL03 887 aaKnown RBP8.53□□□□□ -1.04
SNF8-204ENST00000506104 CLCA2Q9UQC9 943 aa8.53□□□□□ -1.04
SNF8-204ENST00000506104 PCDHGA1Q9Y5H4 931 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms