RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SLC9A1P19634 815 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 CTSOP43234 321 aaPredicted RBP25.52■■□□□ 1.68
HERC4-212ENST00000505760 GRIA4P48058 902 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 ECT2LQ008S8 904 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 ARID5BQ14865 1188 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 CST6Q15828 149 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 CAMK4Q16566 473 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 ADAT2Q7Z6V5 191 aaKnown RBP25.52■■□□□ 1.68
HERC4-212ENST00000505760 GLRX5Q86SX6 157 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 ATP6V0D2Q8N8Y2 350 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.52■■□□□ 1.68
HERC4-212ENST00000505760 APEX2Q9UBZ4 518 aa25.52■■□□□ 1.68
HERC4-212ENST00000505760 DSPP15924 2871 aaKnown RBP25.52■■□□□ 1.68
HERC4-212ENST00000505760 EDDM13A0A1B0GTR0 161 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 TARSL2A2RTX5 802 aaKnown RBP25.51■■□□□ 1.67
HERC4-212ENST00000505760 TTC34A8MYJ7 566 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 KCNU1A8MYU2 1149 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 F5H5T6 163 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 MID1O15344 667 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 IGLV3-25P01717 112 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 SUZ12Q15022 739 aaKnown RBP25.51■■□□□ 1.67
HERC4-212ENST00000505760 TAF5Q15542 800 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 C9orf64Q5T6V5 341 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 KIAA0895LQ68EN5 471 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 MMAAQ8IVH4 418 aaKnown RBP25.51■■□□□ 1.67
HERC4-212ENST00000505760 RHBDD1Q8TEB9 315 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 OMDQ99983 421 aa25.51■■□□□ 1.67
HERC4-212ENST00000505760 NYNRINQ9P2P1 1898 aaKnown RBP25.51■■□□□ 1.67
HERC4-212ENST00000505760 SYNJ2BP-COX16A0A087WUM0 186 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 SRRM3A6NNA2 597 aaPredicted RBP25.5■■□□□ 1.67
HERC4-212ENST00000505760 BECN2A8MW95 431 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 RNASEH2AO75792 299 aaKnown RBP25.5■■□□□ 1.67
HERC4-212ENST00000505760 SLC2A3P11169 496 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 ABCB4P21439 1286 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 PITX1P78337 314 aaPredicted RBP25.5■■□□□ 1.67
HERC4-212ENST00000505760 CDK17Q00537 523 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 EXOC3L4Q17RC7 722 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 LAYNQ6UX15 382 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 APCDD1Q8J025 514 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 RNF34Q969K3 372 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 PPP1R13BQ96KQ4 1090 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 CDC6Q99741 560 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 COX16Q9P0S2 106 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 SERGEFQ9UGK8 458 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 SLCO3A1Q9UIG8 710 aa25.5■■□□□ 1.67
HERC4-212ENST00000505760 RALYQ9UKM9 306 aaKnown RBP25.5■■□□□ 1.67
HERC4-212ENST00000505760 ITIH6Q6UXX5 1313 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 A0A1W2PP55 124 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 LRRC72A6NJI9 287 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 NNMTP40261 264 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 GALCP54803 685 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 APBA1Q02410 837 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 RABGAP1LQ5R372 815 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 DBX2Q6ZNG2 339 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 SLCO6A1Q86UG4 719 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 PASD1Q8IV76 773 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 IGSF8Q969P0 613 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 RPL10LQ96L21 214 aaKnown RBP25.49■■□□□ 1.67
HERC4-212ENST00000505760 NOX5Q96PH1 765 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 CPXM1Q96SM3 734 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 DDIT4Q9NX09 232 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 PKD1L2Q7Z442 2459 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 TP53BP1Q12888 1972 aaPredicted RBP25.49■■□□□ 1.67
HERC4-212ENST00000505760 PLXNA2O75051 1894 aa25.49■■□□□ 1.67
HERC4-212ENST00000505760 ANKRD11Q6UB99 2663 aaPredicted RBP25.49■■□□□ 1.67
HERC4-212ENST00000505760 IGHV4-34P06331 123 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 GLI1P08151 1106 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 CCR1P32246 355 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 SLC8A1P32418 973 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 MTIF2P46199 727 aaKnown RBP25.48■■□□□ 1.67
HERC4-212ENST00000505760 PSMD8P48556 350 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 SLC12A1Q13621 1099 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 EFHC1Q5JVL4 640 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 TTC39BQ5VTQ0 682 aaPredicted RBP25.48■■□□□ 1.67
HERC4-212ENST00000505760 NCEH1Q6PIU2 408 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 DEFB106AQ8N104 65 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 CCAR2Q8N163 923 aaKnown RBP25.48■■□□□ 1.67
HERC4-212ENST00000505760 BAHD1Q8TBE0 780 aaPredicted RBP25.48■■□□□ 1.67
HERC4-212ENST00000505760 SHC3Q92529 594 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 NEUROG2Q9H2A3 272 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 FZD4Q9ULV1 537 aa25.48■■□□□ 1.67
HERC4-212ENST00000505760 GTPBP10A4D1E9 387 aaKnown RBP25.47■■□□□ 1.67
HERC4-212ENST00000505760 KCNK3O14649 394 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 HSF2BPO75031 334 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 GRAP2O75791 330 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 PDGFRAP16234 1089 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 NUMBP49757 651 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 STK19P49842 368 aaPredicted RBP25.47■■□□□ 1.67
HERC4-212ENST00000505760 CCT8P50990 548 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 C21orf59P57076 290 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 UBE2HP62256 183 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 RACK1P63244 317 aaKnown RBP25.47■■□□□ 1.67
HERC4-212ENST00000505760 PTK2Q05397 1052 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 EIF4EBP2Q13542 120 aaPredicted RBP25.47■■□□□ 1.67
HERC4-212ENST00000505760 LRSAM1Q6UWE0 723 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 CIR1Q86X95 450 aaPredicted RBP25.47■■□□□ 1.67
HERC4-212ENST00000505760 WDTC1Q8N5D0 677 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 SLC2A13Q96QE2 648 aa25.47■■□□□ 1.67
HERC4-212ENST00000505760 PRMT1Q99873 361 aaKnown RBP25.47■■□□□ 1.67
HERC4-212ENST00000505760 ORAI3Q9BRQ5 295 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 970.2 ms