RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 RTL10Q7L3V2 364 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 GSTA5Q7RTV2 222 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 MAATS1Q7Z4T9 603 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 JAMLQ86YT9 394 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 GRK7Q8WTQ7 553 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 TBC1D31Q96DN5 1066 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 LRRC3Q9BY71 257 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 FRMD8P1Q9BZ68 369 aaPredicted RBP9.64□□□□□ -0.87
TPM3-218ENST00000505010 OSBPL2Q9H1P3 480 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 ATXN3LQ9H3M9 355 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 SMPD4Q9NXE4 827 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 DLL3Q9NYJ7 618 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 PCYOX1Q9UHG3 505 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 DMGDHQ9UI17 866 aaKnown RBP9.64□□□□□ -0.87
TPM3-218ENST00000505010 CDH22Q9UJ99 828 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 DNPEPQ9ULA0 475 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 ZNF148Q9UQR1 794 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 HS3ST4Q9Y661 456 aa9.64□□□□□ -0.87
TPM3-218ENST00000505010 CLUHO75153 1309 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 TRAV19A0A0A6YYK7 116 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ESYT3A0FGR9 886 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 FAM187AA6NFU0 413 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ZSCAN5CA6NGD5 496 aaPredicted RBP9.63□□□□□ -0.87
TPM3-218ENST00000505010 E9PAM4 449 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 H7C0C1 242 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 STK25O00506 426 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 DYNC1I1O14576 645 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 FGF19O95750 216 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 PTPN2P17706 415 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 EPHB2P29323 1055 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 HTR7P34969 479 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ATP5OP48047 213 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 HCAR3P49019 387 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 HARS2P49590 506 aaKnown RBP9.63□□□□□ -0.87
TPM3-218ENST00000505010 COG7P83436 770 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 GBE1Q04446 702 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ATAT1Q5SQI0 421 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 RAP1GAP2Q684P5 730 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 TXNDC8Q6A555 127 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 TMCO3Q6UWJ1 677 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 GAREM2Q75VX8 874 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 C14orf80Q86SX3 495 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ZC3H18Q86VM9 953 aaKnown RBP9.63□□□□□ -0.87
TPM3-218ENST00000505010 CHSY1Q86X52 802 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 CDKL3Q8IVW4 592 aaPredicted RBP9.63□□□□□ -0.87
TPM3-218ENST00000505010 UNC45BQ8IWX7 931 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 IFT20Q8IY31 132 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 CCDC33Q8N5R6 958 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ARL14EPQ8N8R7 260 aaPredicted RBP9.63□□□□□ -0.87
TPM3-218ENST00000505010 MAB21L3Q8N8X9 362 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 SLC35B2Q8TB61 432 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 RUBCNQ92622 972 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 BTN2A3PQ96KV6 586 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 SLC22A12Q96S37 553 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 PARD6BQ9BYG5 372 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 TRIM31Q9BZY9 425 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 RNF38Q9H0F5 515 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 RAB17Q9H0T7 212 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 DPH5Q9H2P9 285 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 PRDM16Q9HAZ2 1276 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 PIDD1Q9HB75 910 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ETNK2Q9NVF9 386 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 ZDHHC7Q9NXF8 308 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 FBXL21Q9UKT6 434 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 VANGL2Q9ULK5 521 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 UTP11Q9Y3A2 253 aaKnown RBP9.63□□□□□ -0.87
TPM3-218ENST00000505010 KMT2BQ9UMN6 2715 aaPredicted RBP9.63□□□□□ -0.87
TPM3-218ENST00000505010 ACACBO00763 2458 aa9.63□□□□□ -0.87
TPM3-218ENST00000505010 CCDC195A0A1B0GUA6 201 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 SGK1O00141 431 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 NRG2O14511 850 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 DCLK1O15075 740 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 FGF10O15520 208 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 STC2O76061 302 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 OLFM2O95897 454 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 ITGAVP06756 1048 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 RHOP08100 348 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 RBP3P10745 1247 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 ERCC2P18074 760 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 HDCP19113 662 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 MCM3P25205 808 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 CORO1AP31146 461 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 SERPINB6P35237 376 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 CCR2P41597 374 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 NR2C2P49116 596 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 SLC11A2P49281 568 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 VPS41P49754 854 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 EPHA5P54756 1037 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 VSNL1P62760 191 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 NTHL1P78549 312 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 NRG1Q02297 640 aaPredicted RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 LMNB2Q03252 620 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 MTA1Q13330 715 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 TDGQ13569 410 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 AUHQ13825 339 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 PTK6Q13882 451 aa9.62□□□□□ -0.87
TPM3-218ENST00000505010 PAFAH1B3Q15102 231 aaKnown RBP9.62□□□□□ -0.87
TPM3-218ENST00000505010 TEAD2Q15562 447 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms