RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ABCB8Q9NUT2 735 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 NDFIP2Q9NV92 336 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 DNAI1Q9UI46 699 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 FBXO10Q9UK96 956 aa13.66□□□□□ -0.22
PDLIM7-212ENST00000504380 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 TYW5A2RUC4 315 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 LRRD1A4D1F6 860 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 DAPK3O43293 454 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 EGFP01133 1207 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 KRT7P08729 469 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 KDELR1P24390 212 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 TARSP26639 723 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 MZF1P28698 734 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 HLA-FP30511 346 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 CDH4P55283 916 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 PRKCQQ04759 706 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 ZNF177Q13360 481 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 CDH18Q13634 790 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 DPYSL2Q16555 572 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 GEN1Q17RS7 908 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 MPP7Q5T2T1 576 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 EMC10Q5UCC4 262 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 RFX8Q6ZV50 586 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 PEX26Q7Z412 305 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 POLNQ7Z5Q5 900 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 ANKS1BQ7Z6G8 1248 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 PSTKQ8IV42 348 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 FLCNQ8NFG4 579 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 PNKPQ96T60 521 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 CALN1Q9BXU9 219 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 ZDHHC4Q9NPG8 344 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 ARHGEF4Q9NR80 690 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 ETNK2Q9NVF9 386 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 PPARGC1AQ9UBK2 798 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 ZNF212Q9UDV6 495 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 AMFRQ9UKV5 643 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
PDLIM7-212ENST00000504380 KIAA1549LQ6ZVL6 1849 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 ATG2BQ96BY7 2078 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 A0A1B0GVM2 712 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TBC1D3BA6NDS4 549 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TCAF2A6NFQ2 919 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TMEM221A6NGB7 291 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 C3orf70A6NLC5 250 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 PRRT4C9JH25 899 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 H3BRJ5 948 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 M0R296 226 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 CLDN11O75508 207 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 KAT7O95251 611 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 RHOCP08134 193 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 GLULP15104 373 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 RHOQP17081 205 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 ERCC2P18074 760 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 IL4RP24394 825 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 ARL4AP40617 200 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 CSKP41240 450 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 SEC13P55735 322 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 STARD6P59095 220 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 AMPD2Q01433 879 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 DPYSL3Q14195 570 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TMEM196Q5HYL7 178 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 LRRC38Q5VT99 294 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TTC39BQ5VTQ0 682 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 RNF219Q5W0B1 726 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TMEM215Q68D42 235 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 RNF43Q68DV7 783 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 ZNF852Q6ZMS4 543 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 CHST9Q7L1S5 443 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 APCDD1Q8J025 514 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 FIBINQ8TAL6 211 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 SORCS1Q8WY21 1168 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TSC1Q92574 1164 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 CALR3Q96L12 384 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 CSPG4P5Q96PW8 444 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 LTB4R2Q9NPC1 389 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 GGA2Q9UJY4 613 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 INTS6Q9UL03 887 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 TECTAO75443 2155 aa13.64□□□□□ -0.23
PDLIM7-212ENST00000504380 F5P12259 2224 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 A0A0D9SEW6 157 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 KANSL1LA0AUZ9 987 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 FAM170BA6NMN3 283 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 K7EQS6 105 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 MAN2B1O00754 1011 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 DDX3YO15523 660 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 PSTPIP1O43586 416 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 APODP05090 189 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 PABPC1P11940 636 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 CTNNA2P26232 953 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 OR1E1P30953 314 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 HOXC13P31276 330 aa13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 CTNNA1P35221 906 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 GRSF1Q12849 480 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDLIM7-212ENST00000504380 ZNF211Q13398 564 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms