RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 RFFLQ8WZ73 363 aa11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 RPRD1AQ96P16 312 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 CD248Q9HCU0 757 aa11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 RBM12Q9NTZ6 932 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 SPATA6Q9NWH7 488 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 PLK2Q9NYY3 685 aa11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 IP6K2Q9UHH9 426 aa11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 FZD10Q9ULW2 581 aa11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 CLEC4EQ9ULY5 219 aa11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 NEU3Q9UQ49 428 aa11.06□□□□□ -0.64
UBE2D3-212ENST00000502563 MUC22E2RYF6 1773 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 CHD5Q8TDI0 1954 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 SYNJ2BP-COX16A0A087WUM0 186 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ILVBLA1L0T0 632 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 MYO1FO00160 1098 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 FGF10O15520 208 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 LILRB5O75023 590 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 LRCH4O75427 683 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 SRPRAP08240 638 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 RHOQP17081 205 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ETFBP38117 255 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 NBL1P41271 181 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 MAPKAPK2P49137 400 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 CDO1Q16878 200 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 PLEKHG6Q3KR16 790 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 EFHC2Q5JST6 749 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 C6orf118Q5T5N4 469 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ERMARDQ5T6L9 678 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 TMEM215Q68D42 235 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 CXorf57Q6NSI4 855 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 CYP4V2Q6ZWL3 525 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 METTL3Q86U44 580 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 NLRP14Q86W24 1093 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 VSIG1Q86XK7 387 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ARFGAP1Q8N6T3 406 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 FAM71BQ8TC56 605 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 UBE2Q2Q8WVN8 375 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 IGSF8Q969P0 613 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 MYEOVQ96EZ4 313 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ALG14Q96F25 216 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 NUP85Q9BW27 656 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ZYG11BQ9C0D3 744 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 TMEM245Q9H330 911 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ABCB8Q9NUT2 735 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 TMEM248Q9NWD8 314 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ZSCAN32Q9NX65 697 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 COX16Q9P0S2 106 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 RCOR3Q9P2K3 495 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 HCN2Q9UL51 889 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 VANGL2Q9ULK5 521 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 OR51B4Q9Y5P0 310 aa11.05□□□□□ -0.64
UBE2D3-212ENST00000502563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 H0Y626 953 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 TRIM24O15164 1050 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 TSPAN3O60637 253 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 ADAM23O75077 832 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 LRIG2O94898 1065 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 GJB6O95452 261 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 SP9P0CG40 484 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 COL9A1P20849 921 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 SATB1Q01826 763 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 KDSRQ06136 332 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 LMAN2Q12907 356 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 ZNF177Q13360 481 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 DPYSL2Q16555 572 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 SDE2Q6IQ49 451 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 POLNQ7Z5Q5 900 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 WDR5BQ86VZ2 330 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 LONP2Q86WA8 852 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 TMEM139Q8IV31 216 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 TXLNBQ8N3L3 684 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 CCDC185Q8N715 623 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 ZNF564Q8TBZ8 553 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 WFDC5Q8TCV5 224 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 TBC1D31Q96DN5 1066 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 EPAS1Q99814 870 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 POLMQ9NP87 494 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 ANAPC7Q9UJX3 599 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 USP18Q9UMW8 372 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 PLA2G4CQ9UP65 541 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 SLC8A2Q9UPR5 921 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 EPN1Q9Y6I3 576 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 CKAP5Q14008 2032 aa11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-212ENST00000502563 WDFY4Q6ZS81 3184 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 A0A1W2PQF6 199 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 ZNF487B1APH4 448 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 PRPSAP2O60256 369 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 ALDH1A2O94788 518 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 PROSCO94903 275 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 NDUFA10O95299 355 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 IPO7O95373 1038 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 APBB3O95704 486 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 POLR2EP19388 210 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 MIPP30301 263 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 CD70P32970 193 aa11.03□□□□□ -0.64
UBE2D3-212ENST00000502563 SLC1A1P43005 524 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms