RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 TTC9Q92623 222 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 WBP1Q96G27 269 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 SLC39A13Q96H72 371 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 GDF3Q9NR23 364 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 AASDHPPTQ9NRN7 309 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 RAB20Q9NX57 234 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 HPSEQ9Y251 543 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 COQ4Q9Y3A0 265 aa13.13□□□□□ -0.31
LMNA-218ENST00000502357 LY6G6EA0A0G2JKS1 128 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
LMNA-218ENST00000502357 LRRC72A6NJI9 287 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 ERVH48-1M5A8F1 160 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 CALUO43852 315 aaPredicted RBP13.12□□□□□ -0.31
LMNA-218ENST00000502357 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
LMNA-218ENST00000502357 ASLP04424 464 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 VAV1P15498 845 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 GLDCP23378 1020 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 CCDC173Q0VFZ6 552 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 KCNH2Q12809 1159 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 EIF4EBP2Q13542 120 aaPredicted RBP13.12□□□□□ -0.31
LMNA-218ENST00000502357 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 PITRM1Q5JRX3 1037 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 MFN1Q8IWA4 741 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 APCDD1Q8J025 514 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 STK40Q8N2I9 435 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 FRS2Q8WU20 508 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 BAP1Q92560 729 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 SERAC1Q96JX3 654 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 CNGB3Q9NQW8 809 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 XPO7Q9UIA9 1087 aaKnown RBP13.12□□□□□ -0.31
LMNA-218ENST00000502357 RCOR1Q9UKL0 485 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 PCDHB1Q9Y5F3 818 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 U3KQA8 63 aa13.12□□□□□ -0.31
LMNA-218ENST00000502357 J3QKU1 62 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 SIGLEC6O43699 453 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 LZTS3O60299 673 aaPredicted RBP13.11□□□□□ -0.31
LMNA-218ENST00000502357 MT-CO3P00414 261 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 SRPRAP08240 638 aaKnown RBP13.11□□□□□ -0.31
LMNA-218ENST00000502357 C5AR1P21730 350 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 MZF1P28698 734 aaPredicted RBP13.11□□□□□ -0.31
LMNA-218ENST00000502357 PSMC2P35998 433 aaKnown RBP13.11□□□□□ -0.31
LMNA-218ENST00000502357 ARRB1P49407 418 aaPredicted RBP13.11□□□□□ -0.31
LMNA-218ENST00000502357 CXADRP78310 365 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 DPYDQ12882 1025 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 MS4A13Q5J8X5 152 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 NAPEPLDQ6IQ20 393 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 SND1Q7KZF4 910 aaKnown RBP eCLIP13.11□□□□□ -0.31
LMNA-218ENST00000502357 IQCHQ86VS3 1027 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 NUCKS1Q9H1E3 243 aaKnown RBP13.11□□□□□ -0.31
LMNA-218ENST00000502357 LRRC4Q9HBW1 653 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 STIM2Q9P246 746 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 CYTH4Q9UIA0 394 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 SARDHQ9UL12 918 aa13.11□□□□□ -0.31
LMNA-218ENST00000502357 TDRD6O60522 2096 aaKnown RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 EDDM13A0A1B0GTR0 161 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 RNF225M0QZC1 329 aaPredicted RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 PLRG1O43660 514 aaKnown RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 RTN2O75298 545 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 ACTN2P35609 894 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 PSMD8P48556 350 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 RPL34P49207 117 aaKnown RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 STK19P49842 368 aaPredicted RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 TAS2R38P59533 333 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 SKOR1P84550 965 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 ZNF211Q13398 564 aaPredicted RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 ADAM9Q13443 819 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 NUGGCQ68CJ6 796 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 LCLAT1Q6UWP7 414 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 CEP57L1Q8IYX8 460 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 CFAP52Q8N1V2 620 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 HJURPQ8NCD3 748 aaPredicted RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 OR14C36Q8NHC7 312 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 GANCQ8TET4 914 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 IRGQQ8WZA9 623 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 SKA1Q96BD8 255 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 ALG14Q96F25 216 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 RPL10LQ96L21 214 aaKnown RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 OMDQ99983 421 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 CPNE5Q9HCH3 593 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 ASCL3Q9NQ33 180 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 UCKL1Q9NWZ5 548 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
LMNA-218ENST00000502357 MAPK8IP1Q9UQF2 711 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 CA5BQ9Y2D0 317 aa13.1□□□□□ -0.31
LMNA-218ENST00000502357 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
LMNA-218ENST00000502357 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
LMNA-218ENST00000502357 RNF103O00237 685 aa13.09□□□□□ -0.31
LMNA-218ENST00000502357 CAPN9O14815 690 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms