RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	AP5Z1	O43299	807 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	ACADM	P11310	421 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	GZMA	P12544	262 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	NDUFV2	P19404	249 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	OXTR	P30559	389 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	HOXC13	P31276	330 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	CSK	P41240	450 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	PLK1	P53350	603 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	ECT2L	Q008S8	904 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	ZBTB16	Q05516	673 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	KLHL30	Q0D2K2	578 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	SFSWAP	Q12872	951 aa	Known RBP	10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	ARID5B	Q14865	1188 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	CSRP2	Q16527	193 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	MAP7D1	Q3KQU3	841 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	PLEKHG6	Q3KR16	790 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	FUT11	Q495W5	492 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	PITRM1	Q5JRX3	1037 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	OTUD1	Q5VV17	481 aa	Predicted RBP	10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	PMS2CL	Q68D20	193 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	KIAA1211L	Q6NV74	962 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	DNAJC24	Q6P3W2	148 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	DCUN1D2	Q6PH85	259 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	BNIPL	Q7Z465	357 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	DCLK2	Q8N568	766 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	OR2T3	Q8NH03	318 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	CYB5D2	Q8WUJ1	264 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	RXFP2	Q8WXD0	754 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	SORCS1	Q8WY21	1168 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	PRCC	Q92733	491 aa	Predicted RBP	10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	TRIM11	Q96F44	468 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	SIK2	Q9H0K1	926 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	HAUS4	Q9H6D7	363 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	PARVA	Q9NVD7	372 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	USP18	Q9UMW8	372 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	BOLA1	Q9Y3E2	137 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.84	□□□□□ -0.67	4e-17	■□□□□ 10.7
FXR1-222	ENST00000498658	ITIH6	Q6UXX5	1313 aa		10.84	□□□□□ -0.67
FXR1-222	ENST00000498658	GPR179	Q6PRD1	2367 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	TARSL2	A2RTX5	802 aa	Known RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	RNASEH1	O60930	286 aa	Known RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	ADCY5	O95622	1261 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	GPD1	P21695	349 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	PRKCH	P24723	683 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	RFC1	P35251	1148 aa	Predicted RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	PBX1	P40424	430 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF143	P52747	638 aa	Predicted RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	AIF1	P55008	147 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	ZBED6	P86452	979 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	ATP11A	P98196	1134 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	SPEM2	Q0P670	501 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	CAMK2G	Q13555	558 aa	Predicted RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	PTPRN	Q16849	979 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	CCDC14	Q49A88	953 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	FSCB	Q5H9T9	825 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	C6orf118	Q5T5N4	469 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	SETD3	Q86TU7	594 aa	Predicted RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	FAM131B	Q86XD5	332 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	TMPRSS6	Q8IU80	811 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	KIAA2013	Q8IYS2	634 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	MCOLN2	Q8IZK6	566 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	EMC1	Q8N766	993 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	WFDC5	Q8TCV5	224 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	CENPI	Q92674	756 aa	Predicted RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	IGSF8	Q969P0	613 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	MYEOV	Q96EZ4	313 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	SIPA1	Q96FS4	1042 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	SYT11	Q9BT88	431 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	ITM2C	Q9NQX7	267 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	VPS45	Q9NRW7	570 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	SEMA4G	Q9NTN9	838 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	IFNK	Q9P0W0	207 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	CAPN11	Q9UMQ6	739 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	SCML1	Q9UN30	329 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	TBC1D30	Q9Y2I9	924 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	LUC7L2	Q9Y383	392 aa	Known RBP	10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	RAD54B	Q9Y620	910 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	PLXND1	Q9Y4D7	1925 aa		10.83	□□□□□ -0.68
FXR1-222	ENST00000498658	IGLV3-10	A0A075B6K4	115 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	DRGX	A6NNA5	263 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658		E9PAM4	449 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	DCLK1	O15075	740 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	RTN2	O75298	545 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	NDUFS2	O75306	463 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	SERPING1	P05155	500 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	TPM1	P09493	284 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF806	P0C7X5	589 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	MYBL1	P10243	752 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	TFE3	P19532	575 aa	Predicted RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	CD6	P30203	668 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ADRA1B	P35368	520 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	HOXD12	P35452	270 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ETFB	P38117	255 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	MPL	P40238	635 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	KRT83	P78385	493 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	NRG1	Q02297	640 aa	Predicted RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	RPL6	Q02878	288 aa	Known RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	CREB5	Q02930	508 aa		10.82	□□□□□ -0.68

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