RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 NFIL3Q16649 462 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 SGO2Q562F6 1265 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 TBC1D3GQ6DHY5 549 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 TBC1D3CQ6IPX1 549 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 PCSK4Q6UW60 755 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 KDM7AQ6ZMT4 941 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 ERICH1Q86X53 443 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 TBC1D3Q8IZP1 549 aaPredicted RBP14.45□□□□□ -0.1
CCDC58-207ENST00000498466 AADATQ8N5Z0 425 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 KDM1BQ8NB78 822 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 HJURPQ8NCD3 748 aaPredicted RBP14.45□□□□□ -0.1
CCDC58-207ENST00000498466 FBXL13Q8NEE6 735 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 UBA3Q8TBC4 463 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 RFFLQ8WZ73 363 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 NAF1Q96HR8 494 aaKnown RBP14.45□□□□□ -0.1
CCDC58-207ENST00000498466 LMLNQ96KR4 655 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 CNGB3Q9NQW8 809 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 INTS6Q9UL03 887 aaKnown RBP14.45□□□□□ -0.1
CCDC58-207ENST00000498466 TPX2Q9ULW0 747 aaKnown RBP14.45□□□□□ -0.1
CCDC58-207ENST00000498466 ERVW-1Q9UQF0 538 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 MAPK8IP1Q9UQF2 711 aa14.45□□□□□ -0.1
CCDC58-207ENST00000498466 ZNF462Q96JM2 2506 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 EDDM13A0A1B0GTR0 161 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 ADH1BP00325 375 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 IL1BP01584 269 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 IGLV3-27P01718 113 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 SRPRAP08240 638 aaKnown RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 CD19P15391 556 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 C5AR1P21730 350 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 ACP1P24666 158 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 CTSOP43234 321 aaPredicted RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 TBX4P57082 545 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 DAOAP59103 153 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 PPP2CBP62714 309 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 RPS24P62847 133 aaKnown RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 PPP2CAP67775 309 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 ADAM9Q13443 819 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 ARID5BQ14865 1188 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 PITRM1Q5JRX3 1037 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 RNF219Q5W0B1 726 aaPredicted RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 NAPEPLDQ6IQ20 393 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 MSANTD2Q6P1R3 559 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 MMS22LQ6ZRQ5 1243 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 PRPF39Q86UA1 669 aaKnown RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 SPATS2Q86XZ4 545 aaKnown RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 CACTIN-AS1Q8N1I8 211 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 STK40Q8N2I9 435 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 DCBLD1Q8N8Z6 715 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 MFSD2AQ8NA29 543 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 ZNF248Q8NDW4 579 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 PRICKLE1Q96MT3 831 aaPredicted RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 FAM129BQ96TA1 746 aa14.44□□□□□ -0.1
CCDC58-207ENST00000498466 DDX50Q9BQ39 737 aaKnown RBP14.44□□□□□ -0.1
CCDC58-207ENST00000498466 C10orf142B7Z368 130 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 PIK3R2O00459 728 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 MAGEC1O60732 1142 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 SDC3O75056 442 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 MOCS3O95396 460 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 MT-CO3P00414 261 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 SETSIPP0DME0 302 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 ECT2LQ008S8 904 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 E2F1Q01094 437 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 PROX2Q3B8N5 592 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 FSCBQ5H9T9 825 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 BROXQ5VW32 411 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 NADSYN1Q6IA69 706 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.43□□□□□ -0.1
CCDC58-207ENST00000498466 KANSL1Q7Z3B3 1105 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 KCTD13Q8WZ19 329 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 CCDC47Q96A33 483 aaKnown RBP14.43□□□□□ -0.1
CCDC58-207ENST00000498466 MYEOVQ96EZ4 313 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 SLCO3A1Q9UIG8 710 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 KNTC1P50748 2209 aa14.43□□□□□ -0.1
CCDC58-207ENST00000498466 TP53BP1Q12888 1972 aaPredicted RBP14.43□□□□□ -0.1
CCDC58-207ENST00000498466 LATO43561 262 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 STX10O60499 249 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 MYL1P05976 194 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 MZF1P28698 734 aaPredicted RBP14.42□□□□□ -0.1
CCDC58-207ENST00000498466 MAT2AP31153 395 aaKnown RBP14.42□□□□□ -0.1
CCDC58-207ENST00000498466 RGS7P49802 495 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 PCBP4P57723 403 aaKnown RBP14.42□□□□□ -0.1
CCDC58-207ENST00000498466 TMPRSS3P57727 454 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 DAB2P98082 770 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 STAT4Q14765 748 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 HS1BP3Q53T59 392 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 CFAP52Q8N1V2 620 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 SCML4Q8N228 414 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 AZIN2Q96A70 460 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 RPL10LQ96L21 214 aaKnown RBP14.42□□□□□ -0.1
CCDC58-207ENST00000498466 NUCKS1Q9H1E3 243 aaKnown RBP14.42□□□□□ -0.1
CCDC58-207ENST00000498466 PCDHB1Q9Y5F3 818 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 PTPRQQ9UMZ3 2332 aa14.42□□□□□ -0.1
CCDC58-207ENST00000498466 ITIH6Q6UXX5 1313 aa14.41□□□□□ -0.1
CCDC58-207ENST00000498466 K7ELQ4 463 aaPredicted RBP14.41□□□□□ -0.1
CCDC58-207ENST00000498466 O00370 1275 aa14.41□□□□□ -0.1
CCDC58-207ENST00000498466 TRIM38O00635 465 aa14.41□□□□□ -0.1
CCDC58-207ENST00000498466 SIGLEC6O43699 453 aa14.41□□□□□ -0.1
CCDC58-207ENST00000498466 LUC7L3O95232 432 aaKnown RBP14.41□□□□□ -0.1
CCDC58-207ENST00000498466 LTFP02788 710 aa14.41□□□□□ -0.1
CCDC58-207ENST00000498466 VDRP11473 427 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms