RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 NUGGCQ68CJ6 796 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 LCLAT1Q6UWP7 414 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 KRBA2Q6ZNG9 492 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 CFAP52Q8N1V2 620 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 TSC1Q92574 1164 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 FCRL2Q96LA5 508 aaPredicted RBP16.65■□□□□ 0.26
MUC1-220ENST00000498431 SPATA32Q96LK8 384 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 OMDQ99983 421 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 GOLPH3LQ9H4A5 285 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 PRORYQ9H606 182 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 SLCO3A1Q9UIG8 710 aa16.65■□□□□ 0.26
MUC1-220ENST00000498431 ARID1BQ8NFD5 2236 aaPredicted RBP16.64■□□□□ 0.25
MUC1-220ENST00000498431 CETN3O15182 167 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 RNASEH1O60930 286 aaKnown RBP16.64■□□□□ 0.25
MUC1-220ENST00000498431 FYNP06241 537 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
MUC1-220ENST00000498431 CCR5P51681 352 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 METAP1P53582 386 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 ADPRHP54922 357 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 PPP2CBP62714 309 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 PPP2CAP67775 309 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 BECN1Q14457 450 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 ARID5BQ14865 1188 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 C6orf118Q5T5N4 469 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 FBXL19Q6PCT2 694 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 STK40Q8N2I9 435 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 IRGQQ8WZA9 623 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 AZIN2Q96A70 460 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 SERAC1Q96JX3 654 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 RPL10LQ96L21 214 aaKnown RBP16.64■□□□□ 0.25
MUC1-220ENST00000498431 IRX2Q9BZI1 471 aaPredicted RBP16.64■□□□□ 0.25
MUC1-220ENST00000498431 GDF3Q9NR23 364 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 XPO7Q9UIA9 1087 aaKnown RBP16.64■□□□□ 0.25
MUC1-220ENST00000498431 FZD4Q9ULV1 537 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 AK5Q9Y6K8 562 aa16.64■□□□□ 0.25
MUC1-220ENST00000498431 TARSL2A2RTX5 802 aaKnown RBP16.63■□□□□ 0.25
MUC1-220ENST00000498431 M0QYV0 167 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 RNF225M0QZC1 329 aaPredicted RBP16.63■□□□□ 0.25
MUC1-220ENST00000498431 C1SP09871 688 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 VAV1P15498 845 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 STK19P49842 368 aaPredicted RBP16.63■□□□□ 0.25
MUC1-220ENST00000498431 NXPH1P58417 271 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
MUC1-220ENST00000498431 CDH18Q13634 790 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 DCAF6Q58WW2 860 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 MS4A13Q5J8X5 152 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 TMEM270Q6UE05 265 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 KANSL1Q7Z3B3 1105 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 SPATS2Q86XZ4 545 aaKnown RBP16.63■□□□□ 0.25
MUC1-220ENST00000498431 APCDD1Q8J025 514 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 KDM1BQ8NB78 822 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 OR14C36Q8NHC7 312 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 DQX1Q8TE96 717 aaKnown RBP16.63■□□□□ 0.25
MUC1-220ENST00000498431 SLC39A7Q92504 469 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 SKA1Q96BD8 255 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 MIS12Q9H081 205 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 DOCK9Q9BZ29 2069 aa16.63■□□□□ 0.25
MUC1-220ENST00000498431 EDDM13A0A1B0GTR0 161 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 TLR4O00206 839 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 LUC7L3O95232 432 aaKnown RBP16.62■□□□□ 0.25
MUC1-220ENST00000498431 MOCS2O96007 188 aaPredicted RBP16.62■□□□□ 0.25
MUC1-220ENST00000498431 SRPRAP08240 638 aaKnown RBP16.62■□□□□ 0.25
MUC1-220ENST00000498431 GOT1P17174 413 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 BRD2P25440 801 aaKnown RBP16.62■□□□□ 0.25
MUC1-220ENST00000498431 DRD3P35462 400 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 ANP32AP39687 249 aaKnown RBP16.62■□□□□ 0.25
MUC1-220ENST00000498431 PRCPP42785 496 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 PMS1P54277 932 aaKnown RBP16.62■□□□□ 0.25
MUC1-220ENST00000498431 ECT2LQ008S8 904 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 C19orf57Q0VDD7 668 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 RTP5Q14D33 572 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 SFMBT2Q5VUG0 894 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 SND1Q7KZF4 910 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■□□□□ 8.2
MUC1-220ENST00000498431 ZNF557Q8N988 423 aaPredicted RBP16.62■□□□□ 0.25
MUC1-220ENST00000498431 PTPRN2Q92932 1015 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 KAT5Q92993 513 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 SLC39A13Q96H72 371 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 KIAA1257Q9ULG3 409 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 NAALADL1Q9UQQ1 740 aa16.62■□□□□ 0.25
MUC1-220ENST00000498431 TYW5A2RUC4 315 aaKnown RBP16.61■□□□□ 0.25
MUC1-220ENST00000498431 ATXN7O15265 892 aaPredicted RBP16.61■□□□□ 0.25
MUC1-220ENST00000498431 YKT6O15498 198 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 LATO43561 262 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 PAEPP09466 180 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 MZF1P28698 734 aaPredicted RBP16.61■□□□□ 0.25
MUC1-220ENST00000498431 ARRB1P49407 418 aaPredicted RBP16.61■□□□□ 0.25
MUC1-220ENST00000498431 SFSWAPQ12872 951 aaKnown RBP16.61■□□□□ 0.25
MUC1-220ENST00000498431 CNGA2Q16280 664 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 LRRC69Q6ZNQ3 347 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 LGI2Q8N0V4 545 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 FCRL3Q96P31 734 aaPredicted RBP16.61■□□□□ 0.25
MUC1-220ENST00000498431 DDX50Q9BQ39 737 aaKnown RBP16.61■□□□□ 0.25
MUC1-220ENST00000498431 NRSN2Q9GZP1 204 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 ARHGAP20Q9P2F6 1191 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 TLR6Q9Y2C9 796 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 ZDHHC9Q9Y397 364 aa16.61■□□□□ 0.25
MUC1-220ENST00000498431 CEP83Q9Y592 693 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms