RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 HACD1B0YJ81 288 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TNFRSF10AO00220 468 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 LAMTOR5O43504 91 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 NDST2P52849 883 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 POLR2LP62875 67 aaKnown RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 SMTNL2Q2TAL5 461 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 RFX8Q6ZV50 586 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TFAP2DQ7Z6R9 452 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TSTD1Q8NFU3 115 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TTC8Q8TAM2 541 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 VAT1Q99536 393 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 ZSWIM1Q9BR11 485 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 C1QTNF1Q9BXJ1 281 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 C1QTNF7Q9BXJ2 289 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 CARD9Q9H257 536 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 CRISPLD1Q9H336 500 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 AGO1Q9UL18 857 aaKnown RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 CA14Q9ULX7 337 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TRANK1O15050 2925 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 HHLA1C9JL84 531 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 NDUFS2O75306 463 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 LCA5LO95447 670 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 GLP2RO95838 553 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 DNTTP04053 509 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 LINC00271P0C7V0 271 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 RARAP10276 462 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 IGFBP6P24592 240 aaPredicted RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 PPARGP37231 505 aaPredicted RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 NRLP54845 237 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 RPL7AP62424 266 aaKnown RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 ETF1P62495 437 aaKnown RBP8.86□□□□□ -0.99
U2AF1-212ENST00000496462 P3H1Q32P28 736 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 MARC1Q5VT66 337 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 CEP68Q76N32 757 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TMC8Q8IU68 726 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 BBS7Q8IWZ6 715 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 KCNV2Q8TDN2 545 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 ZDHHC4Q9NPG8 344 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 TMEM59LQ9UK28 342 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 DNPEPQ9ULA0 475 aa8.86□□□□□ -0.99
U2AF1-212ENST00000496462 CCDC188H7C350 402 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 SGK1O00141 431 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 CST8O60676 142 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 EFEMP2O95967 443 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 ZC3H14Q6PJT7 736 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 ZNF662Q6ZS27 426 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 KATNAL2Q8IYT4 538 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 WDTC1Q8N5D0 677 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 KRT35Q92764 455 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 GDAP1L1Q96MZ0 367 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 PACSIN1Q9BY11 444 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 SMG9Q9H0W8 520 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 GPATCH2LQ9NWQ4 482 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 GGA2Q9UJY4 613 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 RPL34P49207 117 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 CACNA2D1P54289 1103 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 ZNF449Q6P9G9 518 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 SLC35F6Q8N357 371 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 TFB1MQ8WVM0 346 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 MAGOHBQ96A72 148 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 ASIC4Q96FT7 647 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 KLC2Q9H0B6 622 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 S1PR5Q9H228 398 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 PPARGC1AQ9UBK2 798 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 ASIC3Q9UHC3 531 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 PABPN1LA6NDY0 278 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 KAT7O95251 611 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 PRNPP04156 253 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 EIF3EP60228 445 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 MRPS21P82921 87 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 GNA12Q03113 381 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 HTR4Q13639 388 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 TAF5Q15542 800 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 PRSS36Q5K4E3 855 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 RFWD3Q6PCD5 774 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 SPOCD1Q6ZMY3 1216 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 VSIG1Q86XK7 387 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 RTL3Q8N8U3 475 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 RAB17Q9H0T7 212 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 MTRF1LQ9UGC7 380 aaKnown RBP8.85□□□□□ -0.99
U2AF1-212ENST00000496462 FZD10Q9ULW2 581 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 EFR3BQ9Y2G0 817 aa8.85□□□□□ -0.99
U2AF1-212ENST00000496462 SCAMP3O14828 347 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 ANXA9O76027 345 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 STIP1P31948 543 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 CLCN6P51797 869 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 BIRC2Q13490 618 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 ARHGEF7Q14155 803 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 RFTN1Q14699 578 aaPredicted RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 ZNF77Q15935 545 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 WHAMMP3Q1A5X7 153 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 MBLAC2Q68D91 279 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 ERAP2Q6P179 960 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 PARM1Q6UWI2 310 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 SYT10Q6XYQ8 523 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 PID1Q7Z2X4 250 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
U2AF1-212ENST00000496462 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
U2AF1-212ENST00000496462 FSD1LQ9BXM9 530 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms